Accessibility navigation


The IntFOLD Server Results Page (Version 7.0)

Please cite the relevant paper:

McGuffin, L. J., Edmunds N. S., Genc, A. G., Alharbi, S. M. A., Salehe, B. R. and Adiyaman, R. (2023) Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock servers. Nucleic Acids Research. gkad297. DOI PubMed

Links to graphical output:
Download machine readable results in CASP format:
Results will be available for 21 days after job completion (subject to server capacity)

Useful results? Please complete our short survey
Tertiary Structure Predictions: Top 5 multi-template 3D models for H1135_A | Help
Model ID and
PDBsum links for all templates used
Confidence
and P-value
Global model quality score Local model quality plot
(click images to download plots)
3D map of model quality
IntFOLD7
AF2
TS3
4
0

CERT:
2.284E-5
0.7598



IntFOLD7
AF2
TS3
4
0
rel

CERT:
2.399E-5
0.7572



IntFOLD7
wPPAS
multi1
TS1

3unpA
5ywzA2
CERT:
2.449E-5
0.7561



IntFOLD7
wdPPAS
multi1
TS1

3unpA
5ywzA2
CERT:
2.449E-5
0.7561



IntFOLD7
AF2
TS4
1
0

CERT:
2.51E-5
0.7548



Disorder prediction is carried out using DISOclust:
McGuffin, L. J. (2008) Intrinsic disorder prediction from the analysis of multiple protein fold recognition models. Bioinformatics, 24, 1789-1804. PubMed
Disorder prediction for H1135_A | Help
Click image to download plot in PostScript format.
Domain boundary prediction for H1135_A | Help
Click image to download model or view prediction using Jmol. The model above is coloured according to the predicted domains.
Ligand binding site prediction is carried out using FunFOLD:
Roche, D. B., Buenavista, M. T., McGuffin, L. J. (2013) The FunFOLD2 server for the prediction of protein-ligand interactions. Nucleic Acids Res., 41, W303-7. PubMed
Ligand binding residues prediction for H1135_A | Help
Click image to download model or view prediction using Jmol. Predicted ligand binding residues are shown as blue sticks in the image above.
Model quality assessment is carried out using ModFOLD:
McGuffin, L.J., Aldowsari, F., Alharbi, S. and Adiyaman, R. (2021) ModFOLD8: accurate global and local quality estimates for 3D protein models. Nucleic Acids Research, 49, W425-W430. DOI PubMed
Full model quality assessment results for H1135_A | Help
Model ID and
PDBsum links for all templates used
Confidence
and P-value
Global model quality score Local model quality plot
(click images to download plots)
3D map of model quality
IntFOLD7
AF2
TS3
4
0

CERT:
2.284E-5
0.7598



IntFOLD7
AF2
TS3
4
0
rel

CERT:
2.399E-5
0.7572



IntFOLD7
wPPAS
multi1
TS1

3unpA
5ywzA2
CERT:
2.449E-5
0.7561



IntFOLD7
wdPPAS
multi1
TS1

3unpA
5ywzA2
CERT:
2.449E-5
0.7561



IntFOLD7
AF2
TS4
1
0

CERT:
2.51E-5
0.7548



IntFOLD7
AF2
TS2
2
0

CERT:
2.513E-5
0.7547



IntFOLD7
AF2
TS4
1
0
rel

CERT:
2.755E-5
0.7498



IntFOLD7
IntFOLDTS60
multi3
TS1

4dxtA
5ywzA
CERT:
2.774E-5
0.7495



IntFOLD7
AF2
TS5
3
0
rel

CERT:
2.83E-5
0.7484



IntFOLD7
AF2
TS2
2
0
rel

CERT:
2.832E-5
0.7484



IntFOLD7
dPPAS2
multi7
TS1

3unpA
5ywzA
5ywzA2
CERT:
2.848E-5
0.7481



IntFOLD7
AF2
TS5
3
0

CERT:
2.856E-5
0.7479



IntFOLD7
COMA
multi8
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
COMA
multi7
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
COMA
multi6
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
COMA
multi4
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
COMA
multi3
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
COMA
multi2
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
CNFsearch
multi8
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
CNFsearch
multi7
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
CNFsearch
multi6
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
CNFsearch
multi4
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
CNFsearch
multi3
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
CNFsearch
multi2
TS1

5ywzA
CERT:
2.858E-5
0.7479



IntFOLD7
dPPAS2
multi5
TS1

3unpA
5ywzA
CERT:
2.865E-5
0.7478



IntFOLD7
wMUSTER
multi5
TS1

5ywzA
5ywzA2
CERT:
2.869E-5
0.7477



IntFOLD7
AF2
TS1
5
0

CERT:
2.895E-5
0.7472



IntFOLD7
wPPAS
multi7
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
wPPAS
multi5
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
wdPPAS
multi7
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
wdPPAS
multi5
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
PPAS
multi7
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
PPAS
multi5
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
Env-PPAS
multi7
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
Env-PPAS
multi5
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
dPPAS
multi7
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
dPPAS
multi5
TS1

5ywzA
5ywzA2
CERT:
3.011E-5
0.7451



IntFOLD7
HHsearch
multi8
TS1

5ywzA
CERT:
3.111E-5
0.7434



IntFOLD7
HHsearch
multi7
TS1

5ywzA
CERT:
3.111E-5
0.7434



IntFOLD7
HHsearch
multi6
TS1

5ywzA
CERT:
3.111E-5
0.7434



IntFOLD7
HHsearch
multi4
TS1

5ywzA
CERT:
3.111E-5
0.7434



IntFOLD7
HHsearch
multi3
TS1

5ywzA
CERT:
3.111E-5
0.7434



IntFOLD7
HHsearch
multi2
TS1

5ywzA
CERT:
3.111E-5
0.7434



IntFOLD7
wPPAS
multi8
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
wPPAS
multi6
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
wdPPAS
multi8
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
wdPPAS
multi6
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
SPARKSX
multi7
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
SPARKSX
multi6
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
PPAS
multi8
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
PPAS
multi6
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
IntFOLDTS140
multi3
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
IntFOLDTS140
multi2
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
Env-PPAS
multi8
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
Env-PPAS
multi6
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
dPPAS
multi8
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
dPPAS
multi6
TS1

5ywzA
CERT:
3.145E-5
0.7428



IntFOLD7
IntFOLDTS140
multi1
TS1

5ywzA
CERT:
3.216E-5
0.7416



IntFOLD7
wMUSTER
multi8
TS1

5ywzA
CERT:
3.222E-5
0.7415



IntFOLD7
wMUSTER
multi7
TS1

5ywzA
CERT:
3.222E-5
0.7415



IntFOLD7
wMUSTER
multi6
TS1

5ywzA
CERT:
3.222E-5
0.7415



IntFOLD7
wMUSTER
multi4
TS1

5ywzA
CERT:
3.222E-5
0.7415



IntFOLD7
wMUSTER
multi3
TS1

5ywzA
CERT:
3.222E-5
0.7415



IntFOLD7
wMUSTER
multi2
TS1

5ywzA
CERT:
3.222E-5
0.7415



IntFOLD7
wMUSTER
multi1
TS1

5ywzA
3unpA
CERT:
3.354E-5
0.7394



IntFOLD7
AF2
TS1
5
0
rel

CERT:
3.507E-5
0.7370



IntFOLD7
PPAS
multi3
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
PPAS
multi2
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
LOMETS
multi3
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
LOMETS
multi2
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
LOMETS
multi1
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
Env-PPAS
multi3
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
Env-PPAS
multi2
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
dPPAS
multi3
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
dPPAS
multi2
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
dPPAS2
multi3
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
dPPAS2
multi2
TS1

5ywzA2
CERT:
3.576E-5
0.7360



IntFOLD7
COMA
multi5
TS1

5ywzA
3unpA
CERT:
3.602E-5
0.7356



IntFOLD7
COMA
multi1
TS1

5ywzA
3unpA
CERT:
3.602E-5
0.7356



IntFOLD7
wPPAS
multi3
TS1

3unpA
5ywzA2
5ywzA
CERT:
3.951E-5
0.7306



IntFOLD7
wdPPAS
multi3
TS1

3unpA
5ywzA2
5ywzA
CERT:
3.951E-5
0.7306



IntFOLD7
PPAS
multi4
TS1

5ywzA2
3unpA
CERT:
4.093E-5
0.7288



IntFOLD7
PPAS
multi1
TS1

5ywzA2
3unpA
CERT:
4.093E-5
0.7288



IntFOLD7
dPPAS
multi4
TS1

5ywzA2
3unpA
CERT:
4.093E-5
0.7288



IntFOLD7
dPPAS
multi1
TS1

5ywzA2
3unpA
CERT:
4.093E-5
0.7288



IntFOLD7
dPPAS2
multi4
TS1

5ywzA2
3unpA
CERT:
4.093E-5
0.7288



IntFOLD7
dPPAS2
multi1
TS1

5ywzA2
3unpA
CERT:
4.093E-5
0.7288



IntFOLD7
LOMETS
multi4
TS1

5ywzA2
3unpA
CERT:
4.101E-5
0.7287



IntFOLD7
Env-PPAS
multi4
TS1

5ywzA2
3unpA
CERT:
4.101E-5
0.7287



IntFOLD7
Env-PPAS
multi1
TS1

5ywzA2
3unpA
CERT:
4.101E-5
0.7287



IntFOLD7
CNFsearch
multi5
TS1

5ywzA
5ed8A
CERT:
4.265E-5
0.7266



IntFOLD7
CNFsearch
multi1
TS1

5ywzA
5ed8A
CERT:
4.265E-5
0.7266



IntFOLD7
HHsearch
multi5
TS1

5ywzA
4dxtA
CERT:
4.513E-5
0.7236



IntFOLD7
HHsearch
multi1
TS1

5ywzA
4dxtA
CERT:
4.513E-5
0.7236



IntFOLD7
SPARKSX
multi5
TS1

5ywzA
3unpA
CERT:
4.767E-5
0.7207



IntFOLD7
SPARKSX
multi2
TS1

6r15A
CERT:
6.272E-5
0.7060



IntFOLD7
IT5
TS3

CERT:
6.855E-5
0.7013



IntFOLD7
SPARKSX
multi3
TS1

6r15A
5ywzA
CERT:
8.436E-5
0.6903



IntFOLD7
SPARKSX
multi1
TS1

6r15A
5ywzA
CERT:
8.436E-5
0.6903



IntFOLD7
HHpred
TS1

4dxtA
5ed8A
CERT:
1.104E-4
0.6760



IntFOLD7
HHpred
TS2

4dxtA
5ed8A
CERT:
1.134E-4
0.6745



IntFOLD7
IT5
TS1

CERT:
1.168E-4
0.6730



IntFOLD7
IntFOLDTS60
multi1
TS1

4dxtA
3unpA
CERT:
1.244E-4
0.6696



IntFOLD7
IntFOLDTS60
multi2
TS1

4dxtA
CERT:
1.383E-4
0.6640



IntFOLD7
HHpred
TS3

4dxtA
5ed8A
CERT:
2.224E-4
0.6387



IntFOLD7
tR2
TS0
1
0.25

CERT:
2.557E-4
0.6313



IntFOLD7
tR2
TS0
2
0.15

CERT:
2.621E-4
0.6299



IntFOLD7
tR2
TS0
1
0.45

CERT:
3.077E-4
0.6214



IntFOLD7
tR2
TS0
0
0.05

CERT:
3.145E-4
0.6202



IntFOLD7
tR2
TS0
0
0.15

CERT:
3.263E-4
0.6183



IntFOLD7
tR2
TS0
0
0.35

CERT:
3.284E-4
0.6179



IntFOLD7
dPPAS2
multi8
TS1

3unpA
CERT:
3.389E-4
0.6163



IntFOLD7
dPPAS2
multi6
TS1

3unpA
CERT:
3.389E-4
0.6163



IntFOLD7
wPPAS
multi4
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
wPPAS
multi2
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
wdPPAS
multi4
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
wdPPAS
multi2
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
spk2
multi8
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
spk2
multi7
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
spk2
multi6
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
spk2
multi4
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
spk2
multi3
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
spk2
multi2
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
sp3
multi8
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
sp3
multi7
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
sp3
multi6
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
sp3
multi4
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
sp3
multi3
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
sp3
multi2
TS1

3unpA
CERT:
3.688E-4
0.6118



IntFOLD7
tR2
TS0
2
0.45

CERT:
3.783E-4
0.6104



IntFOLD7
tR2
TS0
2
0.25

CERT:
3.789E-4
0.6103



IntFOLD7
tR2
TS0
0
0.25

CERT:
3.854E-4
0.6094



IntFOLD7
tR2
TS0
1
0.35

CERT:
3.902E-4
0.6088



IntFOLD7
tR2
TS0
1
0.05

CERT:
4.032E-4
0.6070



IntFOLD7
sp3
multi5
TS1

3unpA
7pwfH
CERT:
4.117E-4
0.6059



IntFOLD7
tR2
TS0
2
0.35

CERT:
4.299E-4
0.6036



IntFOLD7
tR2
TS0
2
0.05

CERT:
4.373E-4
0.6027



IntFOLD7
sp3
multi1
TS1

3unpA
7yxvA
CERT:
4.46E-4
0.6016



IntFOLD7
tR2
TS0
1
0.15

CERT:
4.682E-4
0.5991



IntFOLD7
tR2
TS0
0
0.45

CERT:
5.392E-4
0.5915



IntFOLD7
spk2
multi5
TS1

3unpA
7pwfB
CERT:
6.248E-4
0.5837



IntFOLD7
IT5
TS2

CERT:
7.575E-4
0.5735



IntFOLD7
spk2
multi1
TS1

3unpA
7u7nD
HIGH:
2.329E-3
0.5137



IntFOLD7
DMPf
TS1

HIGH:
4.335E-3
0.4806



IntFOLD7
DMPf
TS2

HIGH:
6.471E-3
0.4593



Page navigation

 

Search Form