The ModFOLD Server Results

Please cite the following papers:

Maghrabi, A.H.A. & McGuffin, L.J. (2017) ModFOLD6: an accurate web server for the global and local quality estimation of 3D models of proteins, 45, W416-W421, Nucleic Acids Res. doi: 10.1093/nar/gkx332. PubMed

McGuffin, L.J., Shuid, A.M., Kempster, R., Maghrabi, A.H.A., Nealon J.O., Salehe, B.R., Atkins, J.D. & Roche, D.B. (2017) Accurate Template Based Modelling in CASP12 using the IntFOLD4-TS, ModFOLD6 and ReFOLD methods. Proteins: Structure, Function, and Bioinformatics, 86 Suppl 1, 335-344, doi: 10.1002/prot.25360. PubMed

Click on the links below to download machine readable results files:

• Download Quality Assessment file (raw model quality prediction scores in CASP QA format)
• Make a compressed file containing all evaluated 3D models (models are in PDB format with predicted per-residue errors in the B-factor column)

Results will be available for 21 days after job completion (subject to server capacity)

Graphical ModFOLD6 results for T0859 | Help
Model name	Confidence and P-value	Global model quality score	Residue error plot (click image for large version)	3D view of residue error (click image for large version)
server19_TS1	HIGH: 7.89E-3	0.3953
server07_TS1	LOW: 5.964E-2	0.3438
server12_TS1	LOW: 8.314E-2	0.3315
server06_TS1	POOR: 2.24E-1	0.2914
server15_TS1	POOR: 2.873E-1	0.2804
server18_TS1	POOR: 3.333E-1	0.2734
server11_TS1	POOR: 4.279E-1	0.2605
server08_TS1	POOR: 4.718E-1	0.2548
server17_TS1	POOR: 4.759E-1	0.2543
server14_TS1	POOR: 5.068E-1	0.2504
server09_TS1	POOR: 5.436E-1	0.2458
server05_TS1	POOR: 5.998E-1	0.2387
server01_TS1	POOR: 6.068E-1	0.2378
server10_TS1	POOR: 6.169E-1	0.2365
server16_TS1	POOR: 6.892E-1	0.2268
server20_TS1	POOR: 7.214E-1	0.2222
server04_TS1	POOR: 7.689E-1	0.2149
server03_TS1	POOR: 7.893E-1	0.2115
server02_TS1	POOR: 8.299E-1	0.2040
server13_TS1	POOR: 8.594E-1	0.1976