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The IntFOLD Server Results Page (Version 7.0)

Please cite the relevant paper:

McGuffin, L. J., Edmunds N. S., Genc, A. G., Alharbi, S. M. A., Salehe, B. R. and Adiyaman, R. (2023) Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock servers. Nucleic Acids Research. gkad297. DOI PubMed

Links to graphical output:
Download machine readable results in CASP format:
Results will be available for 21 days after job completion (subject to server capacity)

Tertiary Structure Predictions: Top 5 multi-template 3D models for T1114s2 | Help
Model ID and
PDBsum links for all templates used
Confidence
and P-value
Global model quality score Local model quality plot
(click images to download plots)
3D map of model quality
IntFOLD7
AF2
TS5
1
0
rel

CERT:
7.934E-5
0.6935



IntFOLD7
AF2
TS3
4
0
rel

CERT:
9.976E-5
0.6813



IntFOLD7
AF2
TS4
2
0
rel

CERT:
1.057E-4
0.6783



IntFOLD7
AF2
TS2
3
0
rel

CERT:
1.174E-4
0.6727



IntFOLD7
AF2
TS5
1
0

CERT:
1.214E-4
0.6709



Disorder prediction is carried out using DISOclust:
McGuffin, L. J. (2008) Intrinsic disorder prediction from the analysis of multiple protein fold recognition models. Bioinformatics, 24, 1789-1804. PubMed
Disorder prediction for T1114s2 | Help
Click image to download plot in PostScript format.
Domain boundary prediction for T1114s2 | Help
Click image to download model or view prediction using Jmol. The model above is coloured according to the predicted domains.
Ligand binding site prediction is carried out using FunFOLD:
Roche, D. B., Buenavista, M. T., McGuffin, L. J. (2013) The FunFOLD2 server for the prediction of protein-ligand interactions. Nucleic Acids Res., 41, W303-7. PubMed
Ligand binding residues prediction for T1114s2 | Help
Click image to download model or view prediction using Jmol. Predicted ligand binding residues are shown as blue sticks in the image above.
Model quality assessment is carried out using ModFOLD:
McGuffin, L.J., Aldowsari, F., Alharbi, S. and Adiyaman, R. (2021) ModFOLD8: accurate global and local quality estimates for 3D protein models. Nucleic Acids Research, 49, W425-W430. DOI PubMed
Full model quality assessment results for T1114s2 | Help
Model ID and
PDBsum links for all templates used
Confidence
and P-value
Global model quality score Local model quality plot
(click images to download plots)
3D map of model quality
IntFOLD7
AF2
TS5
1
0
rel

CERT:
7.934E-5
0.6935



IntFOLD7
AF2
TS3
4
0
rel

CERT:
9.976E-5
0.6813



IntFOLD7
AF2
TS4
2
0
rel

CERT:
1.057E-4
0.6783



IntFOLD7
AF2
TS2
3
0
rel

CERT:
1.174E-4
0.6727



IntFOLD7
AF2
TS5
1
0

CERT:
1.214E-4
0.6709



IntFOLD7
AF2
TS1
5
0
rel

CERT:
1.24E-4
0.6698



IntFOLD7
AF2
TS3
4
0

CERT:
1.31E-4
0.6668



IntFOLD7
AF2
TS4
2
0

CERT:
1.475E-4
0.6605



IntFOLD7
AF2
TS2
3
0

CERT:
1.609E-4
0.6559



IntFOLD7
AF2
TS1
5
0

CERT:
1.69E-4
0.6533



IntFOLD7
Env-PPAS
multi8
TS1

1ubmS
3ayxB
4gd3S
5aa5A
HIGH:
2.406E-3
0.5119



IntFOLD7
PPAS
multi8
TS1

1ubmS
3ayxB
4gd3S
5aa5A
HIGH:
2.938E-3
0.5013



IntFOLD7
Env-PPAS
multi4
TS1

1frfS
5aa5A
HIGH:
3.022E-3
0.4998



IntFOLD7
Env-PPAS
multi1
TS1

1frfS
5aa5A
HIGH:
3.022E-3
0.4998



IntFOLD7
HHpred
TS1

5aa5A
4iucS
5aduS
4uqlA
5jskA
1yq9A
3myrA
HIGH:
3.046E-3
0.4994



IntFOLD7
PPAS
multi3
TS1

5aa5A
4gd3S
1ubmS
3ayxB
HIGH:
3.122E-3
0.4981



IntFOLD7
Env-PPAS
multi3
TS1

1frfS
1frvC
4gd3S
1ubmS
3ayxB
HIGH:
3.18E-3
0.4971



IntFOLD7
dPPAS2
multi8
TS1

1ubmS
1frfS
3ayxB
4gd3S
5aa5A
HIGH:
3.218E-3
0.4965



IntFOLD7
dPPAS
multi1
TS1

5aa5A
1frfS
HIGH:
3.328E-3
0.4947



IntFOLD7
SPARKSX
multi3
TS1

5aa5A
3ayxB
1wuiS
1yq9A
HIGH:
3.38E-3
0.4939



IntFOLD7
wPPAS
multi1
TS1

5aa5A
7odgS
HIGH:
3.492E-3
0.4921



IntFOLD7
wPPAS
multi8
TS1

1ubmS
4gd3S
3ayxB
5aa5A
HIGH:
3.506E-3
0.4919



IntFOLD7
HHpred
TS2

5aa5A
4iucS
5aduS
4uqlA
5jskA
1yq9A
3myrA
HIGH:
3.601E-3
0.4905



IntFOLD7
HHpred
TS3

5aa5A
4iucS
5aduS
4uqlA
5jskA
1yq9A
3myrA
HIGH:
3.663E-3
0.4896



IntFOLD7
LOMETS
multi3
TS1

5aa5A
1frvC
1frfS
6ehqS
HIGH:
3.72E-3
0.4887



IntFOLD7
COMA
multi4
TS1

2wpnA
1wuiS
1cc1S
3myrA
5aa5A
HIGH:
3.823E-3
0.4873



IntFOLD7
wdPPAS
multi8
TS1

1ubmS
4gd3S
5aa5A
HIGH:
3.849E-3
0.4869



IntFOLD7
dPPAS
multi3
TS1

5aa5A
1frfS
1frvC
1ubmS
3ayxB
HIGH:
3.976E-3
0.4852



IntFOLD7
tR2
TS0
2
0.15

HIGH:
3.986E-3
0.4851



IntFOLD7
tR2
TS0
1
0.15

HIGH:
4.007E-3
0.4848



IntFOLD7
wPPAS
multi3
TS1

5aa5A
7odgS
1ubmS
HIGH:
4.141E-3
0.4830



IntFOLD7
IntFOLDTS60
multi4
TS1

1yqwA
1wuiS
3myrA
1h2rS
3ayxB
3rgwS
3myrC
5aa5A
3n2wA
1e4iA
HIGH:
4.304E-3
0.4810



IntFOLD7
dPPAS
multi6
TS1

1ubmS
HIGH:
4.342E-3
0.4805



IntFOLD7
dPPAS2
multi6
TS1

1ubmS
HIGH:
4.342E-3
0.4805



IntFOLD7
PPAS
multi1
TS1

5aa5A
4gd3S
HIGH:
4.348E-3
0.4804



IntFOLD7
dPPAS
multi8
TS1

1ubmS
3ayxB
4gd3S
5aa5A
HIGH:
4.365E-3
0.4802



IntFOLD7
tR2
TS0
2
0.35

HIGH:
4.389E-3
0.4799



IntFOLD7
wPPAS
multi5
TS1

1ubmS
4gd3S
HIGH:
4.44E-3
0.4793



IntFOLD7
wMUSTER
multi1
TS1

5aa5A
1frfS
HIGH:
4.461E-3
0.4791



IntFOLD7
SPARKSX
multi8
TS1

1wuiS
3ayxB
3rgwS
3myrC
5aa5A
HIGH:
4.474E-3
0.4789



IntFOLD7
wdPPAS
multi1
TS1

5aa5A
6ehqS
HIGH:
4.479E-3
0.4789



IntFOLD7
wMUSTER
multi8
TS1

1ubmS
7odgS
3ayxB
6ehqS
4gd3S
5aa5A
HIGH:
4.569E-3
0.4778



IntFOLD7
SPARKSX
multi1
TS1

5aa5A
3ayxB
HIGH:
4.692E-3
0.4764



IntFOLD7
dPPAS2
multi4
TS1

1frvC
1frfS
5aa5A
HIGH:
4.792E-3
0.4753



IntFOLD7
CNFsearch
multi8
TS1

3rgwS
1h2aS
5aa5A
6qgrG
HIGH:
4.855E-3
0.4746



IntFOLD7
CNFsearch
multi4
TS1

3rgwS
1h2aS
5aa5A
6qgrG
HIGH:
4.855E-3
0.4746



IntFOLD7
dPPAS2
multi5
TS1

1ubmS
1frfS
HIGH:
4.944E-3
0.4736



IntFOLD7
PPAS
multi7
TS1

1ubmS
HIGH:
5.003E-3
0.4730



IntFOLD7
PPAS
multi6
TS1

1ubmS
HIGH:
5.003E-3
0.4730



IntFOLD7
Env-PPAS
multi7
TS1

1ubmS
HIGH:
5.003E-3
0.4730



IntFOLD7
Env-PPAS
multi6
TS1

1ubmS
HIGH:
5.003E-3
0.4730



IntFOLD7
IntFOLDTS60
multi3
TS1

1yqwA
3ayxB
HIGH:
5.013E-3
0.4729



IntFOLD7
HHsearch
multi7
TS1

1yqwA
3ayxB
HIGH:
5.013E-3
0.4729



IntFOLD7
HHsearch
multi3
TS1

1yqwA
3ayxB
HIGH:
5.013E-3
0.4729



IntFOLD7
IntFOLDTS140
multi3
TS1

1yqwA
1wuiS
3ayxB
HIGH:
5.091E-3
0.4721



IntFOLD7
HHsearch
multi8
TS1

1yqwA
3myrA
HIGH:
5.147E-3
0.4715



IntFOLD7
HHsearch
multi5
TS1

1yqwA
3myrA
HIGH:
5.147E-3
0.4715



IntFOLD7
HHsearch
multi4
TS1

1yqwA
4iucS
HIGH:
5.201E-3
0.4709



IntFOLD7
HHsearch
multi1
TS1

1yqwA
4iucS
HIGH:
5.201E-3
0.4709



IntFOLD7
sp3
multi3
TS1

5aa5A
1h2rS
HIGH:
5.233E-3
0.4706



IntFOLD7
sp3
multi1
TS1

5aa5A
1h2rS
HIGH:
5.233E-3
0.4706



IntFOLD7
COMA
multi3
TS1

2wpnA
1wuiS
HIGH:
5.238E-3
0.4705



IntFOLD7
COMA
multi1
TS1

2wpnA
1wuiS
HIGH:
5.238E-3
0.4705



IntFOLD7
spk2
multi3
TS1

5aa5A
1h2rS
HIGH:
5.243E-3
0.4705



IntFOLD7
spk2
multi1
TS1

5aa5A
1h2rS
HIGH:
5.243E-3
0.4705



IntFOLD7
IntFOLDTS60
multi1
TS1

1yqwA
1wuiS
HIGH:
5.294E-3
0.4700



IntFOLD7
IntFOLDTS140
multi1
TS1

1yqwA
1wuiS
HIGH:
5.294E-3
0.4700



IntFOLD7
spk2
multi5
TS1

1h2rS
4kl8S
HIGH:
5.652E-3
0.4665



IntFOLD7
tR2
TS0
2
0.25

HIGH:
5.769E-3
0.4654



IntFOLD7
wdPPAS
multi4
TS1

5aa5A
HIGH:
5.838E-3
0.4648



IntFOLD7
wdPPAS
multi2
TS1

5aa5A
HIGH:
5.838E-3
0.4648



IntFOLD7
PPAS
multi5
TS1

1ubmS
3ayxB
HIGH:
5.857E-3
0.4646



IntFOLD7
Env-PPAS
multi5
TS1

1ubmS
3ayxB
HIGH:
5.857E-3
0.4646



IntFOLD7
SPARKSX
multi6
TS1

1wuiS
HIGH:
5.864E-3
0.4645



IntFOLD7
wMUSTER
multi4
TS1

5aa5A
HIGH:
5.882E-3
0.4644



IntFOLD7
wMUSTER
multi2
TS1

5aa5A
HIGH:
5.882E-3
0.4644



IntFOLD7
wMUSTER
multi3
TS1

5aa5A
1frfS
1frvC
1ubmS
HIGH:
5.896E-3
0.4642



IntFOLD7
SPARKSX
multi7
TS1

1wuiS
1yq9A
HIGH:
5.902E-3
0.4642



IntFOLD7
dPPAS2
multi7
TS1

1ubmS
3ayxB
HIGH:
5.912E-3
0.4641



IntFOLD7
wPPAS
multi7
TS1

1ubmS
HIGH:
5.929E-3
0.4639



IntFOLD7
wPPAS
multi6
TS1

1ubmS
HIGH:
5.929E-3
0.4639



IntFOLD7
wdPPAS
multi5
TS1

1ubmS
4gd3S
HIGH:
5.966E-3
0.4636



IntFOLD7
Env-PPAS
multi2
TS1

1frfS
HIGH:
6.042E-3
0.4629



IntFOLD7
wMUSTER
multi5
TS1

1ubmS
1frvC
HIGH:
6.067E-3
0.4627



IntFOLD7
wdPPAS
multi3
TS1

5aa5A
6ehqS
1ubmS
HIGH:
6.08E-3
0.4626



IntFOLD7
wdPPAS
multi7
TS1

1ubmS
HIGH:
6.129E-3
0.4622



IntFOLD7
wdPPAS
multi6
TS1

1ubmS
HIGH:
6.129E-3
0.4622



IntFOLD7
dPPAS2
multi3
TS1

1frvC
1frfS
1ubmS
3ayxB
HIGH:
6.244E-3
0.4612



IntFOLD7
dPPAS
multi5
TS1

1ubmS
3ayxB
HIGH:
6.326E-3
0.4605



IntFOLD7
tR2
TS0
1
0.05

HIGH:
6.39E-3
0.4600



IntFOLD7
COMA
multi8
TS1

1wuiS
3ayxB
5aa5A
HIGH:
6.461E-3
0.4594



IntFOLD7
sp3
multi7
TS1

1h2rS
HIGH:
6.493E-3
0.4591



IntFOLD7
sp3
multi6
TS1

1h2rS
HIGH:
6.493E-3
0.4591



IntFOLD7
COMA
multi7
TS1

1wuiS
HIGH:
6.509E-3
0.4590



IntFOLD7
COMA
multi6
TS1

1wuiS
HIGH:
6.509E-3
0.4590



IntFOLD7
CNFsearch
multi5
TS1

3rgwS
1h2aS
HIGH:
6.545E-3
0.4587



IntFOLD7
CNFsearch
multi1
TS1

3rgwS
1h2aS
HIGH:
6.545E-3
0.4587



IntFOLD7
IntFOLDTS60
multi2
TS1

1yqwA
HIGH:
6.575E-3
0.4584



IntFOLD7
IntFOLDTS140
multi2
TS1

1yqwA
HIGH:
6.575E-3
0.4584



IntFOLD7
HHsearch
multi6
TS1

1yqwA
HIGH:
6.575E-3
0.4584



IntFOLD7
HHsearch
multi2
TS1

1yqwA
HIGH:
6.575E-3
0.4584



IntFOLD7
tR2
TS0
0
0.15

HIGH:
6.609E-3
0.4582



IntFOLD7
dPPAS
multi7
TS1

1ubmS
3ayxB
HIGH:
6.629E-3
0.4580



IntFOLD7
tR2
TS0
2
0.45

HIGH:
6.768E-3
0.4569



IntFOLD7
LOMETS
multi1
TS1

5aa5A
HIGH:
6.776E-3
0.4568



IntFOLD7
COMA
multi5
TS1

1wuiS
1yq9A
HIGH:
6.834E-3
0.4564



IntFOLD7
LOMETS
multi4
TS1

5aa5A
HIGH:
6.894E-3
0.4559



IntFOLD7
tR2
TS0
2
0.05

HIGH:
7.02E-3
0.4550



IntFOLD7
tR2
TS0
0
0.05

HIGH:
7.084E-3
0.4545



IntFOLD7
wPPAS
multi4
TS1

5aa5A
HIGH:
7.111E-3
0.4543



IntFOLD7
wPPAS
multi2
TS1

5aa5A
HIGH:
7.111E-3
0.4543



IntFOLD7
wMUSTER
multi7
TS1

1ubmS
HIGH:
7.238E-3
0.4533



IntFOLD7
wMUSTER
multi6
TS1

1ubmS
HIGH:
7.238E-3
0.4533



IntFOLD7
LOMETS
multi2
TS1

5aa5A
HIGH:
7.611E-3
0.4506



IntFOLD7
sp3
multi5
TS1

1h2rS
4kl8S
HIGH:
7.63E-3
0.4505



IntFOLD7
tR2
TS0
0
0.25

HIGH:
7.63E-3
0.4505



IntFOLD7
SPARKSX
multi4
TS1

5aa5A
HIGH:
7.683E-3
0.4501



IntFOLD7
SPARKSX
multi2
TS1

5aa5A
HIGH:
7.683E-3
0.4501



IntFOLD7
dPPAS2
multi1
TS1

1frvC
1frfS
HIGH:
7.706E-3
0.4500



IntFOLD7
SPARKSX
multi5
TS1

1wuiS
3ayxB
HIGH:
7.937E-3
0.4484



IntFOLD7
spk2
multi7
TS1

1h2rS
HIGH:
7.969E-3
0.4482



IntFOLD7
spk2
multi6
TS1

1h2rS
HIGH:
7.969E-3
0.4482



IntFOLD7
dPPAS
multi4
TS1

5aa5A
HIGH:
8.038E-3
0.4477



IntFOLD7
dPPAS
multi2
TS1

5aa5A
HIGH:
8.038E-3
0.4477



IntFOLD7
CNFsearch
multi7
TS1

3rgwS
HIGH:
8.171E-3
0.4469



IntFOLD7
CNFsearch
multi6
TS1

3rgwS
HIGH:
8.171E-3
0.4469



IntFOLD7
CNFsearch
multi3
TS1

3rgwS
HIGH:
8.171E-3
0.4469



IntFOLD7
CNFsearch
multi2
TS1

3rgwS
HIGH:
8.171E-3
0.4469



IntFOLD7
tR2
TS0
1
0.25

HIGH:
8.392E-3
0.4454



IntFOLD7
tR2
TS0
0
0.45

HIGH:
8.525E-3
0.4446



IntFOLD7
PPAS
multi4
TS1

5aa5A
HIGH:
8.644E-3
0.4439



IntFOLD7
PPAS
multi2
TS1

5aa5A
HIGH:
8.644E-3
0.4439



IntFOLD7
tR2
TS0
0
0.35

HIGH:
9.102E-3
0.4411



IntFOLD7
tR2
TS0
1
0.35

HIGH:
9.6E-3
0.4383



IntFOLD7
dPPAS2
multi2
TS1

1frvC
HIGH:
9.707E-3
0.4377



IntFOLD7
IT5
TS1

HIGH:
9.791E-3
0.4372



IntFOLD7
spk2
multi2
TS1

5aa5A
MEDIUM:
1.009E-2
0.4356



IntFOLD7
tR2
TS0
1
0.45

MEDIUM:
1.046E-2
0.4337



IntFOLD7
IntFOLDTS140
multi4
TS1

1yqwA
1wuiS
4gd3S
1ubmS
3ayxB
5aa5A
3n2wA
1e4iA
MEDIUM:
1.048E-2
0.4336



IntFOLD7
sp3
multi2
TS1

5aa5A
MEDIUM:
1.053E-2
0.4334



IntFOLD7
COMA
multi2
TS1

2wpnA
MEDIUM:
1.292E-2
0.4225



IntFOLD7
IT5
TS2

MEDIUM:
1.298E-2
0.4222



IntFOLD7
sp3
multi8
TS1

1h2rS
4kl8S
5aa5A
4b3kA
3n2wA
2x3lA
MEDIUM:
1.427E-2
0.4172



IntFOLD7
spk2
multi8
TS1

1h2rS
4kl8S
5aa5A
1j5rA
MEDIUM:
2.266E-2
0.3926



IntFOLD7
IT5
TS3

MEDIUM:
2.483E-2
0.3877



IntFOLD7
DMPf
TS1

MEDIUM:
2.997E-2
0.3777



IntFOLD7
DMPf
TS3

MEDIUM:
4.298E-2
0.3585



IntFOLD7
DMPf
TS2

LOW:
6.779E-2
0.3343



IntFOLD7
DMPf
TS4

LOW:
7.815E-2
0.3267



IntFOLD7
sp3
multi4
TS1

5aa5A
3n2wA
3bo9A
UNCERT:
4.506E-1
0.2094



IntFOLD7
spk2
multi4
TS1

5aa5A
6o15A
UNCERT:
5.145E-1
0.1959



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