Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3dnpA_COMA_TS10.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3dnpA_COMA_TS10.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3dnpA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.7225131 (Target length: 191, Aligned residues: 138)
RMSD: 1.28
TM-score: 0.69251
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
------------------KQLLALNIDGALLR------S-NGKI-HQATK--DAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLS-DDVVAIGHQYDDLP-IELAGLGVA-GNAVPEIKRKADWVTRSNDEQGVAY--KEYF-R-QQRK------------------
:::::::::::::: : :::: ::::: ::::::::::::::::::::::::::::: : : . : : ::: :. . ::::::::::::::::: :::::::::::::: ::::::::: ::::::::::::::::::::::::: :::: : ::::
MSLNTEIEMNELLEKAKKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRME-Q-L-G-I-T----HYY--------KG--------------------------------------------------------------------------------------------------------------Q---VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQEGHHHHHH