Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1rkqa_spk2_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1rkqa_spk2_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1rkqA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.87958115 (Target length: 191, Aligned residues: 168)
RMSD: 2.16
TM-score: 0.79426
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
SLAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN-----------------------
:::::::: ::::::::: :::::::. . :::::: ::::::::::::::::::::::::::: :: . . .:::.:::: :: :::::::::: ::::: ::.: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
---------------MSLNTEIE--MNELLEKAK--KIKCLICD---------------V----DGVLSD-GLLHIDNHGNELKSFHVQDGMGLKLLM-AA------G-I------------------------------------------QVAIITTAQ-NA--VVDHRMEQLG----ITHYY-KGQV------DKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQEGHHHHHH