Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1rkqa_sp3_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1rkqa_sp3_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1rkqA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.7801047 (Target length: 191, Aligned residues: 149)
RMSD: 2.41
TM-score: 0.70333
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
SLAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGA--LVQKAADGSTVAQTALSYDDYRFLEKLSREVGS-----------HFHALD-RTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPN-----TQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN-----------------------
:::::::: ::::::::: :::::::: : :: :::::::::::::: :::::: :. ..:::: ::.:. :.:::. ..::: : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
---------------MSLNTEIE--MNELLEKAK--KIKCLICD------V--DG----VLSDGLLHIDNHGNELKSFHVQ-DG------------------------MGLKLLMAAGIQVAIITTAQNAV-------------VDHRME-------------QLGITHYYKG--------------------------------------Q--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQEGHHHHHH