Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1nf2a_sp3_TS9.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1nf2a_sp3_TS9.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1nf2A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.7225131 (Target length: 191, Aligned residues: 138)
RMSD: 3.71
TM-score: 0.55409
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEV-AKDIIEYIKPLNVHWQAYI----DDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEI-VPKNVDKGKALRFLRERMNWKKEEI---VVFGD---------NENDLFMFEEAGLRVAME--------NAIEKVKEASDIVTLTNND--SGVSYVLERISTDCLD-------------------------
::::::: ::::::::::::::::::: :::::::::::::::::: : : .. . :: :::::::::::::::: ::::::::::: ::::::::::.. ....::...... ..::: ::: : . .::. :.:. . . ::.:. :::::::....
--------------------------------------------------------------------------------MSLNTEIEMNELLEKAKKIKCLICDVDGVLSDGLLHIDNHGNELKSFHV-Q-D-GM-G--LK-LLMAAGIQVAIITTAQ---NAVVDHRMEQL----GITHYYKGQVDKRSAYQHLKKTLGL-------------NDDEFAYIGDDLPDLPLIQQ-V--G------LGVAVSNAVPQVLEFA--D-----W-RTERTGGRGAVRELCDLI-----LNAQNKAELAITGYLKQEGHHHHHH