Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2odfa_spk2_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2odfa_spk2_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2odfA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.87606835 (Target length: 234, Aligned residues: 205)
RMSD: 3.07
TM-score: 0.71233
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
RFFTEAEGKAVGVENAAAKGDVLLVCEHASA--TIPQKYGTLGLSADVLSS-----H------AAWDPGALAVARLLSEK-FHATLVYQRFSRLVYDCNRPPESPSAMPVKSEIYDIPGNFDLDEAERFARTSALYVPFH--DRVSEIIAERQAAGRKVVVVTIHSFTPVYHGRFREVEIGILHDNDSRLADAMLAGAEGASLTVRRND-PYGPEDGVTHTLRLHALPDGLLNVMIEIRN-------DLIANEGEQAAIAGFLHELMGKALSSIEE-----
..::: ::::::: :::::::.:. ::::::.::::::::::: : ::::::: ::::::::: ::::::::::::::::: ::::::::::::. :::.::.. .: :::::::::: ::: ::::. : ..::::::: ::::::: : : :::::::::::::::::::: .::. :::: : :: ::::::::::: ::::::::::::::::::::::::::::.
-----SNASF-RVVLDPG---HGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFL-RLSERVKKAQEFDADLFISIHADTIDV-HSLRGATVYTISD-EASDAIAK-SL-AESENKVDLL--DGLPKEESLE-L---------TDILLDLTR--------RETHAFS-I---N-FANNVVSNLSKSHINLINNPHRYAD--FQVL--K---AP-DVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSIRQFAEYRQKIMQPL