Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1xu7a_sp3_TS4.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1xu7a_sp3_TS4.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1xu7A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.82051283 (Target length: 234, Aligned residues: 192)
RMSD: 2.73
TM-score: 0.71083
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
QPLNEEFRPEMLQGKKVI------VTGASK----GIGREMAYHLAKM---------GAHVVVTARSK--E-TLQKVVSHCLELGAASAHYIAGT--------------MEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN-F--L-SYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK--AVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTS
: . . :: :::: :::::: ::::::::::::: :::::::: :: : ::::::::::::::::::::::: .::::: ::::::::::: ::: ::::... .... : : ::::::::: : : :::::::::::::: ::::::. .::: ::: :: ::: ::: : ::::::::::::::::.. .::. .:: : ::::::::::::::::: ::::::
--S-N-A---SF--RVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTR-DSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEAS-DAIAKSLAESE-NKV-DLLDGLP-KEES-L--E--LTDILLDLTRRETHAFSINFANNVVSNLS---KSHINLI---NNPH-------RYA--DF----QVL-KAP----D-VPSVLIEIGYLSNKEDEKLLNNPQ-WRK-Q-MAASIAYSIRQFAEYRQ-KIMQPL-----------------------