Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1jogA_HHsearch_TS6.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1jogA_HHsearch_TS6.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1jogA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.31196582 (Target length: 234, Aligned residues: 73)
RMSD: 3.39
TM-score: 0.24883
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
NLNVLDAAFYSLEQTVVQISDRNWFDQPSIVQDTLIAGAI--------------------------------------------------------------------------------------------------------------------------------------------QKFEFVYELSLK--KRQLQQDAI--N-TDD-------IGAYGFKDILREALRFGLIGDSKWVAYRDRNITSHTYDQEKA-AVYAQIDDFLIESSFLLEQLRQ--------
. .:: :::::: ::::::::: : ::: :::::::::::::::::::::: : ::::. :. .. :.. ::::::::::::::.
----------------------------------------SNASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTISDEASDAIAKSLAESENKVDLLDGLPKEESLELTDILLDLTR-RET-HAFSINFANNVVSNLSKSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNK-E-DEKLL-NN-PQ---WRKQMAASIAYSIRQFAEY-------RQKIMQPL