Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2r44A_COMA_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2r44A_COMA_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2r44A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.87586206 (Target length: 145, Aligned residues: 127)
RMSD: 1.9
TM-score: 0.79059
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
GELKSAEEKSLYYRNKIKEVIDEVGKVVVGQKY-INRLLIGI--CTGG--HILLEGVPGLAKTLSVNTLAK---T-DLDFHRIQFTP-DLLPSDLIGTIYNQHKGNFEVKKGPVFSNFILADEVNRSPAKVQSALLEC-QEKQVTIGDTTYPLDNPFLVLATQNPVEQE--GTYPLPEAQVDRF--K-IHLTYLDKESELEVRRVSNNFNYQVQKIVSKNDVLEIRNEINKVTISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAAFFNNRDYVLPEDIKEVAYDILNHRIILNYEAEAEGISTRQIIETILRKVNITK--
.::::::: :::::::: :::: ::::::::::::::::::::: : ::::::::::: ::::::::: ::. :::::::::::::::::::::::: ::: : ::::::::::::::. ::::::::::::: : ::::.
-------------------------VELIGRSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFVYRELTPDNAPQLNDFI------------ALA--QGGTLVLSHPEHLTREQQYHLVQLQSQE----------H-RPFRLIGIGDTSLVELAASNHIIAELYYCFAMTQIACLP-----------------------------------------------------------------------------------------------------------------------------------------------LT