Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_7odca_spk2_TS4.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_7odca_spk2_TS4.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.62356794 (Target length: 611, Aligned residues: 381)
RMSD: 1.7
TM-score: 0.60591
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-----------SSFTKDEFDCHIL--DEGFTAKDILDQKIN--DKDAFYVADLGDILKKHLRWLKALPRVTPF----------YAVKCNDSRAIVSTLAAIGT----GFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASN---GVQM-MTFDSEIELMKVARAHP-----KAKLVLRIAT----------------KFGATLKTSRLLLERAKELNIDVI--GVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGF-SMHLLDIGGGFPGSEDTKL-------KFEEITSVINPALDKYFPSD--SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWEQT---------------FMYYVNDGV-----------------------------------------------------------------------------YGSF--NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDR----IVERCNLPEMHVGDW---MLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK---------------------------------------------------------------
           :::::: ::::::  :::::::::::::::  ::::::::::::::::::::::::::::::          ::::::::::::::::::::    :::::::::::::::::::::::: ::::::::::::::::   :::: :::::::::::::::::     ::::::::::                ..::::::::::::::::::::::  ::::::::::::::::::::::::::::::::::: :::::::::::::::::::       ::::::::::::::::::::  :::::::::::::::::::::::::::::::::.               ..:::::.                                                                              .:::  ::::::::::::::::::::::::::::::   :::::.    :::::::::::::::   ::::::::::::::::::::::::::::::::::::::                                                               
MMDYGIDIWGNENFIIK-NGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT-VNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSI-KPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDIT---CDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV