Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_7odca_sp3_TS4.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_7odca_sp3_TS4.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.62520456 (Target length: 611, Aligned residues: 382)
RMSD: 1.9
TM-score: 0.60558
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-----------SSFTKDEFDCHILD--EGFTAKDILDQKIN-DK-DAFYVADLGDILKKHLRWLKALPRVTPF----------YAVKCNDSRAIVSTLAAIGT----GFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASN---GVQM-MTFDSEIELMKVARAHPKA-----KLVLRIAT----------------KFGATLKTSRLLLERAKELNIDVI--GVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGFS-MHLLDIGGGFPGSEDTKL-------KFEEITSVINPALDKYFPSD--SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWEQTFMYYVNDGV-YG--------------------------------------------------------------------------------------------SFNCI-LYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDG--LDRIVERC-NLPEMHVGDW---MLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK---------------------------------------------------------------
:::::: ::::::: :::::::::::::: :: :::::::::::::::::::::::::::: :::::::::::::::::::: :::::::::::::::::::::::: :::::::::::::::: :::: ::::::::::::::::::: :::::::: ...::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: :::::::::::::::::: :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::.. .. ...:: ::::::::::::::::::::::::::: .::: :::::::: :::::::::: ::::::::::::::::::::::::::::::::::::::
MMDYGIDIWGNENFIIK-NGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT-VNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQ-NPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDIT--CDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV