Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_7odca2_spk2_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_7odca2_spk2_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.39770868 (Target length: 611, Aligned residues: 243)
RMSD: 2.1
TM-score: 0.38529
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
SSFTKDEFDCHILDEG---------------------------------------------FTAKDILDQKINDKDAFYVADLGDILKKHLRWLKAL------PRVTPFYAVKCNDSRAIVSTLAAIG----TGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAAS---NGVQMMTF-DSEIELMKVARAH-------PKAKLVLRIA--------------TKFGATLKTSRLLLERAKELNI--DVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGF-SMHLLDIGGGFPGSEDT-------KLKFEEITSVINPALDKYFPSD--SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...::.. .:.::::::::::::::: ::::::::::::::::::::::::: ::::::::::::::::::::::::: ::::::::::::::: :::::::: ::::::::::::: :::::::::: :.:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::: ::::::::::::::::::. .:..
----------------MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFP-----------HLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT-VNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAV----------------------------------------------------------------------------------------------------------LIAP----------VLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV