Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_7odca2_sp3_TS6.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_7odca2_sp3_TS6.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.39443535 (Target length: 611, Aligned residues: 241)
RMSD: 1.77
TM-score: 0.38447
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
SSFTKDEFDCHILD----------------------------------------------EGFTAKDILDQKINDKDAFYVADLGDILKKHLRWLKAL------PRVTPFYAVKCNDSRAIVSTLAAIG----TGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAAS---NGVQ-MMTFDSEIELMKVARAH-------PKAKLVLRIA--------------TKFGATLKTSRLLLERAKELNI--DVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGF-SMHLLDIGGGFPGSE-------DTKLKFEEITSVINPALDKYFPSD--SGVRIIAEPGRYYVASAFTLAVNIIAKKTVWEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..:::. .::::::::::::::::: ::::::::::::::::::::::::: ::::::::::::::::::::::::: ::::::::::::::: :::: ::::::::::::::::: :::::::::: :.:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ::::::::::::::: :::::::::::::::::::::::: :::::::::::::: :::: ::..
--------------MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFP--------------HLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPIT-VNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVA-ANHA----------------------------------------------------------------------------------------------------------VLIA----------PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV