Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_7odcA_HHsearch_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_7odcA_HHsearch_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.60065466 (Target length: 611, Aligned residues: 367)
RMSD: 1.74
TM-score: 0.5838
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
SSFTKDEFDCHILD--------------------------EGFTAKDILDQKIN--DKDAFYVADLGDILKKHLRWLKALP----------RVTPFYAVKCNDSRAIVSTLAAIG----TGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAA--S-NGV-QMMTFDSEIELMKVA-----RAHPKAKLVLRIAT----------------KFGATLKTSRLLLERAKELNI--DVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGF-SMHLLDIGGGFPGSEDT-K------LKFEEITSVINPALDKYFPS--DSGVRIIAEPGRYYVASAFTLAVNIIAKKTV-------------------------------------------------------------------------------------W---E---QTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIV-E-R--CNLPEMH-VGD--WMLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK-------------------------------------------------------------------
.::::::::::::. ::::::::::::::::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::::::::: ::::::::::: : ::: ::::::::::::::: :::::::::::::: .:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ::::::::::::::::: : :::::::::::::::::::: ::::::::::::::::::::::::::::::. . : :::::::::::::::::::: ::::::::::::::::::::::::::::::::::: : : ::::::: ::: ::::::::::::::::::::::::::::::: :. ..
--------------MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWG-LEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISI-NE-KG--YEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV