Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_7odcA_COMA_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_7odcA_COMA_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.60065466 (Target length: 611, Aligned residues: 367)
RMSD: 1.86
TM-score: 0.57887
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-----------SSFTKDEFDCHILD--EGFTAKDILDQKIN--DKDAFYVADLGDILKKHLRWLKALPRV----------TPFYAVKCNDSRAIVSTLAAIG----TGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAA---SNGVQM-MTFDSEIELMKVARAHPK-----AKLVLRIAT----------------KFGATLKTSRLLLERAKELN--IDVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGF-SMHLLDIGGGFPGSEDT-------KLKFEEITSVINPALDKYFPS-D-SGVRIIAEPGRYYVASAFTLAVNIIAKKTV-------------WEQT-FMYYVNDGVYG-SFNCILYDHAHVK--AL-------LQ-KRPK-------------PDE---------K-YYS-----S-----SIWGP---T------------------------------CD--GLDRIV-ER-CNLPEMHVGD--WMLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK---------------------------------------------------------------------------------
:::::: ::::::: :::::::::::..: ::::::::::::::::::::::::::: :::::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::: :::::: :::::::::::::::::: ::::::::: :::::::::::::::::::: .:::::::::::::::::::::::::::::::::::::: ::::::::::::::::: ::::::::::::::::::::: : :::::::::::::::::::::::::::::: :.:: ::::::::::: ::::::::::::: :: :: :::. .:: : .:: : ::::: : :. :::::: :: :::::::::: ::::::::::::::::: ::..
MMDYGIDIWGNENFIIK-NGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMK--HNLF----------------THPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV