Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3gwqa_sp3_TS9.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3gwqa_sp3_TS9.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3gwqA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.62193125 (Target length: 611, Aligned residues: 380)
RMSD: 2.34
TM-score: 0.58456
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
----ATIDPYSKGLGV--------PGTSIQLTDAARLEWNLLNEDVSLPAAVLYADRVEHNLKWQ-----AFVAEYGVK----LAPHGKTT-APQLFRRQLETGAW---GITLATAHQVRAAYHGGV-S-RVLANQLVGR-R-NVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVN-KQ--LQVLLEL---------GVPGG-RTGVRDAAQRNAVLEAITRYPDTLKLAGVELYEG-VLKEEHEVREFLQSAVAVTRELVEQERFARAPAVLSGAG---------SAWY-------------DVVAEEFVKASETGKV-----------------EVVLRPGCYLTHDV---------GIYRKAQTDIFEGLLPALQLWAY-VQSIPEPDRAIIGLGKRDSAFDAGPEPA-------RHYRPGNEAPRDIAASEGWEIFG----------------L-D-QHAYLRIPAGADLKVGDIAFDISHPCLTFDKWRQVLVVDPAYRVTEVIETFF------------------------------------------------------------------------------------------------------------------
:::::::::::: :...::::::: ::::::::::::::::::::::::::: ::::::::: :::::::: :::::::::::::: :::::::::::::::::: : :::::::::: : :::::::::::::::::::::::::::::::::: :: ::::::: ::::: ::::::::::::::::::::::..:::::::::: :::::::::::::::::::::::::: :::::::::::: .::. :::::::::::::::. :::::::::::::: .:::::::::.:::::::::::: :::::::::::::::::::::::::::: ::::::::::::::::::::::: : : :::::::::::::::::::: : :: :: .. . :::::::::::
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIV---KELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMG-AKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASI-W--DI-TC-----DS-D---GEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV