Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3btnA_HHsearch_TS5.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3btnA_HHsearch_TS5.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3btnA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.60065466 (Target length: 611, Aligned residues: 367)
RMSD: 2.54
TM-score: 0.56104
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
------------------ANYSVGLLDEGTNLGNVIDNYVYEHTLTGKNAFFVGDLGKIVKKHSQWQTVVA----------QIKPFYTVKCNSTPAVLEILAALG----TGFACSSKNEMALVQELGVSPENIIFTSPCKQVSQIKYAA--K-VGVNI-MTCDNEIELKKIAR-----NHPNAKVLLHIATED------------MKFGTTL-KNCRHLLECAKELDV--QIIGVKFHVSSACKEYQVYVHALSDARCVFDMAGEFGFT-MNMLDIGGGFTGTE----------IQLEEVNHVISPLLDIYFPE--GSGIQIISEPGSYYVSSAFTLAVNIIA-KKV---------------------------------------------------------------------------------------------VAFVYYMNDGVYGSFASKLS---TIPEVHKK---P--LFTSSLWGPSCDELDQIVE--SCL-LPELNV-G-D--WLIFDNMGADSFHEPSAFNDFQRPAIYFMMSFSDWYEMQDAGITSDAMMKNFFFAPSC------------------------------------------------------------------
:::::::::: :::::::::::::: : :::::::::::::::::::::::: :::::::::::::::::::::::: ::::::::::::::::::::::::::: :::::::::::: : ::::: :::::::::::::: ::::::::::::::: ::::::: ::::::::::::::: ::::::::::::::::::::::::::::::::::::::: :::::::::::::: :::::::::::::::::::: ::::::::::::::::::::::::::: ... ..:::::::::::::::::. :::::::: . ....::::::::::::::. ::: :::::. : : :::::::::::::::::::::::::::::: ::: :..
MMDYGIDIWGNENFIIKNGKVCINYEKK-PAIIDIVKELRDDG--Y-KGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVN-GFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIIS----INE--KGY----------------EVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV