Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3btnA_COMA_TS5.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3btnA_COMA_TS5.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3btnA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.63502455 (Target length: 611, Aligned residues: 388)
RMSD: 1.88
TM-score: 0.61084
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
----------ANY-SV---GLLD--EG-TNLGNVIDNYVYEHTLTGKNAFFVGDLGKIVKKHSQWQTVVAQIK----------PFYTVKCNSTPAVLEILAALG----TGFACSSKNEMALVQELGVSPENIIFTSPCKQVSQIKYAA--K-VGVNI-MTCDNEIELKKIARNHP-NAKV----LLHIATED-------------MKFGTTLKNCRHLLECAKELD--VQIIGVKFHVSSACKEYQVYVHALSDARCVFDMAGEFGFT-MNMLDIGGGFTGTE----------IQLEEVN-HVISPLLDIYFPE-GSGIQIISEPGSYYVSSAFTLAVNIIA---------------------KK------------------------------------------------------------------------VVAF-VYYMNDGVYGSFASKL--S---TI-PEV-HKK-PLFTSSLWGPS-C-DE-LDQIVESC-LLPELN-VGD--WLIFDNMGADSFHEPSAFNDFQRPAIYFMMSFSDWYEMQDAGITSD--AM-MKNFFFAPSC-------------------------------------------
::: :: :::: :: ::::::::::: : :::::::::::::::::::::::::::::: ::::::::::::::::::::: :::::::::::::::::::::: ::::::::::::::::: : ::::: ::::::::::::::::: :::: :::::::: ::::::::::::::::::::: .::::::::::::::::::::::::::::::::::::::: :::::::::::::: ::::::: ::::::::::::: ::::::::::::::::::::::::::: :: :::: .::::::::::::::: : :: ::. :.. :::.::::::: : :: :::::::: :::::: ::: ::::::::::::::::::::::::::::::::::::::::: :::: :: ::::::::.
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELR-D--DGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGA-PITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGI-IEAQSILDTLEDLDYDIH-AIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV