Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2yxxa_spk2_TS8.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2yxxa_spk2_TS8.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2yxxA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.61047465 (Target length: 611, Aligned residues: 373)
RMSD: 1.99
TM-score: 0.58548
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
---------------------------DI-LRKVAEIH-----GTPTYVYFEETLRKRSRLVKEVFE------GV--NLLPTFAVKANNNPVLLKILREEG----FG-DVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQEHFLR---EDV--RIVNVDSFEE-E----IWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLE----DLDSFERFRS--NIRGLHVHIGSQITRV----EPFVEAFSKVVRASER--YGFEEINIGGGWGINYSGEELDL------SSYREKVVPDLK--------RFKRVIVEIGRYIVAPSGYLLLRVVLVKRRHN----------------------KA-------FVVVDG-------------GNVLI--------------------------RPAL---------------------YSAY-----HRIFV---LGKQGKERADVVGPLCESGD----VIAYDRELPEVEPGD---IIAVENAGAYGYTSN-NYNSTT--RPAEVLVRENG-RISLIRRRET-EDIF-KDVV----------------------------------------------
                           :: ::::::::     ::::::::::::::::::::::::      ::  ::::::::::::::::::::::::    :: ::::::::::::::::::::::::: :::::::::::   :::  :::::::::: :    :::::::::::::::::::::::.::::. ::::::::::::    ::::::::::  .:::::::::::::::    ::::::::::::::::  :::::::::::::::::::::::      ::::::::::::        ::::::::::::::::::::::::::::::.:                      .:       ::::::             :::::                          ::::                     .:::     :::::   ::::::::::::::::::::    :::::::::::::::   ::::::::::::::: ::::::  ::::::::::: :::::::::: :.:. ....                                              
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKS-GGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV