Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2yxxA_COMA_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2yxxA_COMA_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2yxxA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.61047465 (Target length: 611, Aligned residues: 373)
RMSD: 1.99
TM-score: 0.5832
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
--------------------------------DILRKVAEI-HGTPTYVYFEETLRKRSRLVKEVFEGV--------NLLPTFAVKANNNPVLLKILREEG----FG-DVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQEHFL---REDVR-IVNVDSFE-EEIWRE-LNPE-GVE-YFIRVNPEVDAKTHPHI-STGLKKHKFGIPLEDLDS-FER-F--RS-N-IRGLHVHIGSQITRVEPFVEAFSKVVRASERYGFEEI-NIGGGWGINYSGEELD-----------LSSYREKVVPDLKR--------FKRVIVEIGRYIVAPSGYLLLRVVLV------K-------R---RHNKAF-------------VVVDGG-------------N--------------------------VLIRPAL-----------Y---------S-AY-----HRIFVLGKQG-KERA---DVVGPLCESG---DVIAY-DRELPEVEP--GD-IIAVENAGAYGYT-SNNYNST--TRPAEVLVRENGRISL-IRRRETE-DIFKDV------V-----------------------------------------
::::::::: ::::::::::::::::::::::::::: :::::::::::::::::::::::: :: :::::::::::::::::::::::::::::.:::::: ::::: :::::::: :::::: :::: ::: ::::::::: ::::::: :::::::::::::::::: ::: : :: : ::::::::::::::::::::::::::::::::::::: :::::::::::::::: :::::::::::::: :::::::::::::::::::::::::. : : .:::.. .::::: . ::::::: . : :: :::::::::: :::: :::: .:::: ::::: ::::::::: :: ::::::::::::: ::::::: :::::::::::::::: ::::::: :::::: .
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLH-SAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDI-TCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV