Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2todA_COMA_TS6.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2todA_COMA_TS6.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2todA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.57283145 (Target length: 611, Aligned residues: 350)
RMSD: 2.11
TM-score: 0.54663
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-------------------------------------------GDPFFVADLGDIVRKHETWKKCLPRV--T--------PFYAVACNDDWRVLGTLAAL----GTGFDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYAR--D-SGVDV-MTFDCVDELEKVAK-TH-PK--AK-MVLRIST-------------LSVKFGAKVEDCRFILEQAKKLNI--DVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFN-MHILDIGGGFPGTRDAP-------LKFEEIAGVINNALEKHFPP-DL-KLTIVAEPGRYYVASAFTLAVNVIAKKVTP----------------------------------------------------------------------------------A-------QSF--MY-YVNDGVYGSFNCIL-YDHAVVR-PLPQREPIPNEKLYPSSVWGPTCD-GLDQIVE-RYYLPEMQV-GE--WLLFEDMGAYTVVGTSSFN-G-FQSPTIYYVV-S--------------------------------------------------------------------
                                           ::::::::::::::::::::::::::  :        ::::::::::::::::::::    :::::::::::::::::: ::::::::::::::::::::::  : ::::: :::::::::::::: :: ::  :: :::::::             :::::::::::::::::::::::.  ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::       :::::::::::::::::::: :: ::::::::::::::::::::::::::...                                                                                   .       .:.  :: :::::::::::::: ::::::: :::::::. ...::.:::::.::. .:::::: :.::::::: ::  ::::::::::::::::::: : :::::::::: :                                                                    
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQ-EYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEE-PTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV