Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2plja_sp3_TS7.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2plja_sp3_TS7.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2pljA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.60720134 (Target length: 611, Aligned residues: 371)
RMSD: 3.22
TM-score: 0.5533
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-----------------HSQSIFDIHP-VLSAEEIHLIEASV-EQFGAPLLLLDCDVIRQQYRALKNALP----------NVTLHYALKPLPHPVVVRTLLAEG----ASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAY---GCN-VFVVDNLNELEKFKAYR-------DDVELLVRLSF---S---------KKFGCSPEQALVIIETAKEWNI--RIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQVMP------IDQFCA----PINEALSLLPE-TVHVLAEPGRFICAPAVTSVASVMGQAE--REG--------------Q-IWYYLDDG-------------------------IYGS----------------FSGLMFDDARYPLT-T------------------------------IKQG-----GELIPSVLSGPTCDS---V-DVI-AENILLPKLNNGD---LVIGRTMGAYTSATATDFNFFKRAQTIAL---NEFV------------------------------------------------------------------
                 .::::....  .::  ::::::::: :::::::::::::::::::::::::::          ::::::::::::::::::::::::    :::::::::::::::::::::::::::: :::::::::::::   ::: :::::::::::::::::       :::::::::::   :         ::::::::::::::::::::::  ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::      ::::::    ::::::::::: ::::::::::::::::::::::......  ...              . ......:.                         .:::                :::::::::::::. .                              ::..     ...::::........   . ..: .::... ......   :::::::::::::::::::::::::::::   ::::                                                                  
MMDYGIDIWGNENFIIKNGKVCINYE-KKPA--IIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLH-DVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV