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RasMol generated image of per-residue accuracy for the model nFOLD4_2pljA_HHsearch_TS10.bfact.pdb

Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
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through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2pljA_HHsearch_TS10.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2pljA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.59574467 (Target length: 611, Aligned residues: 364)
RMSD: 1.75
TM-score: 0.5778
The alignment (template-model) is shown below:

(":" denotes the residue pairs of distance < 5.0 Angstrom)
HSQSIFDIH---------------------------PVLSAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNALP----------NVTLHYALKPLPHPVVVRTLLAEG----ASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALA---YGCN-VFVVDNLNELEKFKAYRD-DVELLVRLSF------------------SKKFGCSPEQALVIIETAKEWNI--RIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQV------MPIDQFCAPI-----NEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQI--------------------------------------------------------------------------------------------WYYLDDGIYGSFSGLMFDDARYPLTTIKQG--GELIPSVLSGPTCDSVDV---IAE--NILLPKLNNGD--LVIGRTMGAYTSATATDFNFFKRAQT--IALNEFV-------------------------------------------------------------------
                                    ....  ::::::::::::::::::::::::::::::::::::          ::::::::::::::::::::::::    :::::::::::::::::::: ::::::::::::::::::::   :::: :::::::::::::::::: ::::::::::                  .::::::::::::::::::::::  ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::      ::::::::::     ::::::::::::::::::::::::::::::::::::::::::                                                                                            ::::::::::::::::::::::::::::::  ..::::::::::::::::   :::  :::::::::::  ::::::::::::::::::::::::::  ::::::.                                                                   
---------MMDYGIDIWGNENFIIKNGKVCINYEKKPAI--IDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNE-GAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV