Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2pljA_COMA_TS10.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2pljA_COMA_TS10.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2pljA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.59738135 (Target length: 611, Aligned residues: 365)
RMSD: 1.84
TM-score: 0.57741
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
HS-------------------------QSIFDIHPVL-SAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNALPNV-T---------LHYALKPLPHPVVVRTLLAEG----ASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDAL---AYGCNV-FVVDNLNELEKFKAYRDD-VELLVRLSF------------------SKKFGCSPEQALVIIETAKEWNI--RIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQ---Q---VMPIDQFCAPINEALSLLP-ET----VHVLAEPGRFICAPAVTSVASVMGQA-------------------ER-------EGQ----IWYY-----------------LD-------DGIY----GSFSGLMFDDARYPLTT-IKQ--GGEL-IPSVLSG------P--------T----------------CD--SVDVIAE--NIL--LPKLNN-GD--LVIGRTMGAYTSA--TATDFNFFKRAQTIALNEFV-------------------------------------------------------------------
..::::: ..::::: : :::::::::::::::::::::::::::: : ::::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::: :::::: :::::::::::::::::: ::::::::: ::::::::::::::::::::::. ::.::::::::::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::::::::: :: :::::::::::::::::::::::::. :: ::: :::: :: :::: ::::::::::::::::: ::: .::: ::::::: : : :: .:::::: ::: :::::: :: ::::::::::::: ::::..::::::::::::::
--MMDYGIDIWGNENFIIKNGKVCINYEKKPAII---DIVKELRD--D---GYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV