Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2pljA_COMA_TS10.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2pljA_COMA_TS10.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2pljA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.59738135 (Target length: 611, Aligned residues: 365)
RMSD: 1.84
TM-score: 0.57741
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
HS-------------------------QSIFDIHPVL-SAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNALPNV-T---------LHYALKPLPHPVVVRTLLAEG----ASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDAL---AYGCNV-FVVDNLNELEKFKAYRDD-VELLVRLSF------------------SKKFGCSPEQALVIIETAKEWNI--RIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQ---Q---VMPIDQFCAPINEALSLLP-ET----VHVLAEPGRFICAPAVTSVASVMGQA-------------------ER-------EGQ----IWYY-----------------LD-------DGIY----GSFSGLMFDDARYPLTT-IKQ--GGEL-IPSVLSG------P--------T----------------CD--SVDVIAE--NIL--LPKLNN-GD--LVIGRTMGAYTSA--TATDFNFFKRAQTIALNEFV-------------------------------------------------------------------
                           ..:::::    ..:::::  :   :::::::::::::::::::::::::::: :         :::::::::::::::::::::    ::::::::::::::::: ::::::::::::::::::::::   :::::: :::::::::::::::::: :::::::::                  ::::::::::::::::::::::.  ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::   :   ::::::::::::::::::: ::    :::::::::::::::::::::::::.                   ::       :::    ::::                 ::       ::::    ::::::::::::::::: :::  .::: :::::::      :        :                ::  .::::::  :::  :::::: ::  :::::::::::::  ::::..::::::::::::::                                                                   
--MMDYGIDIWGNENFIIKNGKVCINYEKKPAII---DIVKELRD--D---GYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV