Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2p3eA_HHsearch_TS2.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2p3eA_HHsearch_TS2.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2p3eA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.64811784 (Target length: 611, Aligned residues: 396)
RMSD: 2.24
TM-score: 0.61698
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-----ELLKEYNPYLEYRDGELFIE---GVSLKELAQTF-----GTPLYVYSSNFIKERFEAYRKAFP----------DALICYAVKANFNPHLVKLLGELG----AGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAV---DSEI-LMFNVESRQELDVLNEIAG-KLGKKARIAIRVNP---------------SKFGVDIREAQKEYEYASKLEN-LEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGF-DIKYLDIGGGLGIKYKPEDKEPA----PQDLA-------DLLKDLL--VKAKIILEPGRSIMGNAGILITQVQFLKDK-GSKHFIIV--DAG---------------------------------------MNDL--------------------------------------------------IRPSIYN-AYHHIIPVE-TKE---VVADIVGPICETGDFLALD----REIEEVQ-R-GE-YLAVLSAGAYGFAMSSHYNMRPRAAEVLVEN---G-SVKLIRKRENYDYIVEPSLDI---------------------------------------------
..:. ::::::::::::::: ::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::::::::: ::::::::::: :::: ::::::::::::::::::: :::::::::::::: :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: ::::: ::::::: :::::::::::::::::::::::::::::: ..:::::: ::: :::: ::::::: ::::::::: ::: :::::::::..:::::::: ::::::: : :: ::::::::::::::::::::::::::::::: : :::::::::::::::::....
MMDYGIDIW-GNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV