Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2p3eA_COMA_TS2.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2p3eA_COMA_TS2.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2p3eA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.64320785 (Target length: 611, Aligned residues: 393)
RMSD: 1.73
TM-score: 0.6238
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-ELLK-EYN--PYLEYRDGELFI--EG-VSLKELAQT-----FGTPLYVYSSNFIKERFEAYRKAFPDALIC----------YAVKANFNPHLVKLLGELG----AGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDS---EIL-MFNVESRQELDVLNEIAGKLG-KKARIAIRVNP---------------SKFGVDIREAQKEYEYAS-K-LENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFD-IKYLDIGGGLGIKYKPEDKE----PAPQDLAD----LLKDLL--V---KAKIILEPGRSIMGNAGILITQVQFL-------------KDK-----G-SKHFIIV---------DAG--------------M----------------NDLI---------RP-----------------SIY----NAY-----HHIIPVET-KE---V-V-ADIVGPICETG--DFLALDR-EIEEVQR--GEY-LAVLSAGAYGFAMSSHYN-M-RPRAAEVLVENGSVKL--IRKRENYDYIVEPSLDI-----------------------------------------------
:::: ::: :::::::::::: :: ::::::::: :::::::::::::::::::::::::::::: ::::::::::::::::::: :::::::::::::::::: ::::::::::::::::::::::: ::: ::::::::::::::::::::: ::::::::::: :::::::::::::::::: : :::::: :::::::::::::::::::::::::::::::::::: :::::::::::::::::::: :::::::: :::::: : :::::::::::::::::::::::::: ::. . ::::::: ::: : :::: :: ::: ::: :::::::: :: : : ::::: ::::: ::::::: ::::::: ::: :::::::::::::::::: : :::::::::::::::: :::::::::::::..
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYN-NEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFT-MIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDIT-CDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLD--YDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV