Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2oo0A_HHsearch_TS9.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2oo0A_HHsearch_TS9.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2oo0A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.63338786 (Target length: 611, Aligned residues: 387)
RMSD: 2.9
TM-score: 0.58629
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
AGENLYFQSLMNNFGN----------------EEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALP----------RVTPFYAVKCNDSKAIVKTLAATG----TGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAA---NNGVQM-MTFDSEVELMKVARA-----HPKAKLVLRIATD-----DSKAVCRLSVKFGATLRTSRLLLERAKELNI--DVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGF-SMYLLDIGGGFPGSEDVK-------LKFEEITGVINPALDKYFPSD--SGVRIIAEPGRYYVASAFTLAVNII-AKKIV--L-----E-----------------QTF-----------------------------------------------------------------MYYVNDGVYGSFNCILYDHAH--VKPLLQKRPKPDEKYYSSSIWGPT--C-DGLDRIV---ERCDLPEMHV--GD-WMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQN-------------------------------------------------------------------
.:::::::::::: : ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::: ::::::::::::::::: :::::: ::::::::::::::: ::::::::::::: ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: :::::::::::::::::: ::::::::::::::::::::: ::::::::::::::::::::.:::: :.:.. . . ... :.:::...:::: :: ::::: ::::::::.. :::::::::::. . ...:.:. ::......:: :: ::::::::::::::::........::::::::: ..
----------------MMDYGIDIWGNENFIIKNGKVCINYEKKP--A-IIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGA-PITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQS-MP-DFWGLEQNFPIMPLDRL--DEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINE--KG------YEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV