Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2nvaA_COMA_TS3.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2nvaA_COMA_TS3.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2nvaA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.599018 (Target length: 611, Aligned residues: 366)
RMSD: 1.53
TM-score: 0.58265
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
------------------------------MNSVVNNILKAHPHQTKSFYVSSPKIVEDLIDQWTILFPRVT----------PHYAVKCNNDEVLLKTMCDKN----VNFDCASSSEIKKVIQIGVSPSRIIFAHTMKTIDDLIFAK--D-QGVDI-ATFDSSFELDKIHTYHP---NCK--MILRIRCDDP-----NATVQLGNKFGANEDEIRHLLEYAKQLDI--EVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHK-PYILDIGGGLHADID---LS----TYMSDYINDA---IKDFFPEDT---VTIVAEPGRFFAEHYSVLATQVI-GKR--------------VRDGL--YEYF-----------FNESTY-----------GGFS--N---VI-F-----EK--SV----PTPQLLRDVPDDE--EYV-PSVLY------GC-T------------------------C--DG--VDVINHN-VALPELHI-G--DWVYFPSWGAYTNVLTTSFNGFGEYDVYYI-------------------------------------------------------------------------
                              ::::::::::  ::::::::::::::::::::::::::::::          :::::::::::::::::::::    ::::::::::::::::: ::::::::::::::::::::::  : ::::: :::::::::::::::::   :::  ::::::::::     :::::::::::::::::::::::::::::  ::::::::::::::::::::::::::::::::::::::: :::::::::::::::   ::    ::::::::::   :::::::::   ::::::::::::::::::::::: :::              :::::  ::::           .:::::           ::::  :   :: :     ::  ::    :::::::::::::  ::: :::::      :: :                        :  ::  ::::::: :::::::: :  ::::::::::::::::::::::::::::::                                                                         
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRD--DGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV