Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2j66a_sp3_TS5.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2j66a_sp3_TS5.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2j66A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.63175124 (Target length: 611, Aligned residues: 386)
RMSD: 1.37
TM-score: 0.61813
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
--------------------------DQAEITALTKRF-----ETPFYLYDGDFIEAHYRQLRSRTNP---------AIQFYLSLKANNNIHLAKLFRQWGL----GVEVASAGELALARHAGFSAENIIFSGPGKKRSELEIAVQS----GIYCIIAESVEELFYIEELAEK-ENKTARVAIRINPDKSFTAIK--MGGVPRQFGMDESMLDAVMDAVRSLQFTKF-IGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFEKALDIG------KITRTVSDYVQEAR-DTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFV--------------------------------------------------------------------------------------------------IVD-----------GGMHHHAASPMEYIPLEKVTIAGPLCTP---EDCLGKDV-HVPALYPGDL---VCVLNSGAYGLSFSPVHFLG-HPTPIEILKRNG--SYELIRRKGTADDIVAT-QL----------------------------------------------
:::::::::::: ::::::::::::::::::::::::: ::::::::::::::::::::::::: ::::::::::::::::::::::::::: ::::::::::::: .::::::::::::::::::::: ::::::::::::::::::::: :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: ::::::::::::::::::::::::::::::::::::. .:: ::::::::::::::.::::::::::::: :::::::: :::::::::: :::::::::::::::::::: :::::::::::: ::::::::::::::::: ::
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYA---ENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV