Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2j66A_COMA_TS9.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2j66A_COMA_TS9.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2j66A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.63011456 (Target length: 611, Aligned residues: 385)
RMSD: 2.22
TM-score: 0.59821
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
--------------------------DQAEITALTK-----RFETPFYLYDGDFIEAHYRQLRSRTNPAIQFY---------LSLKANNNIHLAKLFRQWG----LGVEVASAGELALARHAGFSAENIIFSGPGKKRSELEIAV---QSGIYC-IIAESVEELFYIEELAEKEN-KTARVAIRINPDKSF--TAIKMGGVPRQFGMDESMLDAVMDAVRS--LQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYF--EKA----LDIGKITRTVSDYVQEARDTR-FPQTTFIIESGRYLLAQAAVYVTEVLY-------------------------RKAS-K-GEVF--VI-VDGGM------------HHHAA----S---------PMEYI-P--------------LEKVTIA---------GP---------------------------L-C--TPEDCLGKDV-HVPALY-PG-D-LVCVLNSGAYGLSFSPVH-FLGHPTPIEILKRNGSYEL--IRRKGTADDIVATQL--------------------------------------------------
:::::::::: :::::::::::::::::::::::::::::::: ::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::: :::::: :::::::::::::::::::: ::::::::::::::: :::::::::::::::::::::::::::: ::.::: :::::::::::::::::::::::::::::::::::::::::::::::::::: ::: ::::::::::::::::::::: ::::::::::::::::::::::::::. ..:: : :::. :. ::::: ::::: : ::::: : .::::.: .: : . .::::::::: :::::. :: : :::::::::::::::::: ..::::::::::::::::: :::::::.....
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFT-MIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLE---DLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV