Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1wkba_spk2_TS10.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1wkba_spk2_TS10.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1wkbA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9361702 (Target length: 611, Aligned residues: 572)
RMSD: 4.31
TM-score: 0.78193
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
LNFKAIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITG-SPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENGEVIYLP-AATLRPETVYGVTNMWVNPNATYVKAKVRRKDKEETWIVSKEAAYKLSFQDREIEVIEEFKGEKLIGKYVRNPVSGDEVIILPAE-FVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDIDPRIV-FPAVEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQEVKEAIAKEMLEKGIAEIMYEFA-EKNVISRFGNRAVIKI-I-HDQWFIDYGNPEWKEKARKALERMK--------ILPET-RRAQFEA-I-IDW-LDKKACARKIGLGTPLPWDPE------WVIESLSDS----TIYMAYYTISRHINKLRQEGKLD------PEKLT---PEFFDYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYEVKGN-VELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDLRWYLRRTEGRDDEAKRYVLRTLADVWVRLMAPFTPHICEELWEKLG
. :.:::::::...:. . ....:::.. ..:::::::::.::.::: :: . . . :::: ::::::::::::::::: ::::::::::::: ::: : :::. :.::::: . ..:::::: :::::::::: : ::::: : :: :::::::::::::::::::::::: ::::::::::: ::. ::::::.. ..:::::::::::::::::: : ::: :....::::::. ..::::... .. ::..:..::..::::: ::::::::::::::: : :::::::: ::::......:::::: : ::::::::::::::::::::::::: :::.: ::::::: : ::: ::::::::::::::::::::: ::::::::: ::::::::::::::::::::::: ::::: :::::::::::....::::::: : : ::::::::::: :::: ::: :::::: :: : ::::::: :::::::::::.: : :::: :: :::: ::: ::::::::::::.::::::::::::::::::............ . . . .:::::::::::::::::.....::: ::::::::.... . ......:..::::::::::...:.:: ..
-------------------M-------------MDYGIDIWGNENFI--I-------------------------------KNGKVCINYE-------------------------KKPAIIDIVKELRDDGYK--GP-L-L-L--RFPH--LIQKQIENIYGNFNKAR-KEFGYKGGFNAVY-------PLK------V-NQYP-GFVKNLV-K-LGKDYNYGLEAGSKAELLL-A--MAYNN-E-GA-PITVNGFKDRELINIGFIAAEMGH--NITLTIEGLNE-LEA-IIDIAKER----------FKPKPNIGLRVRLHSAGVGIW--A-KSG------GINSKFGLTSTELIEAVNLLKE-NK----------LLEQFTMIHFHLGSQI-------TEIHPLKKALNEAGN--I-YTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQD-E-V-QERYLVNFSLF--QSMP-DFW-GLEQNF---PI--M-PLDRLDE-EPTRSASIWDITC-----D-----SDGE-IS---YSKD-KPL-FLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISI-NE-K----G--YEVEGIIEAQSILDTLEDLDYDIHAI-MDILNERISNSK--L------VNDKQKKHILGELYLFLNDNGYLKSI--GV---