Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_1twiA_HHsearch_TS1.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_1twiA_HHsearch_TS1.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 1twiA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.695581 (Target length: 611, Aligned residues: 425)
RMSD: 1.84
TM-score: 0.67149
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-------MLGNDTVEIKDGRFFID---GYDAIELAEK-----FGTPLYVMSEEQIKINYNRYIEAFKRWEEETGK--EFIVAYAYKANANLAITRLLAKLG----CGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGI---EANIRA-FNVDSISELILINETAKEL-GETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYV-NVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGI-EIEDVNLGGGLGIPYYKDKQ----IPTQKDLADAIINTM--LKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTK-------------------WV-------------------------------------------------------------------------MIDAGMNDMMRPAMY-EAYHHIINCK--VKNEKEVVSIAGGLCESSDVFGRDRE----LDKVE-VGD--VLAIFDVGAYGISMANNYNARGRPRMVLTSK--KGVF--LIRERETYADLIAKDIVPPHLL----------------------------------------------
       :::::::::::::::::   ::::::::::     :::::::::::::::::::::::::::::::::  ::::::::::::::::::::::::    :::::::::::::::::::::::::::: :::::::::::   :::::: ::::::::::::::::::: ::::::::::::::::::: ::::::::::::::::::::: : ::::::::: :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::    :::::::::::::::  :::::::::::::::::::::::::::::::.:::::::::                   ::                                                                         ::::::::::::::: ::::::::::  :::....:::::::::::::::::::    ::::: :::  :::::::::::::::::::::::::::::::  ::::  ::::::::::::::...                                                   
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGI-WAKSGGINSKFGLTSTELIEA-V-NLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDY-----DIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV