Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1twiA_HHsearch_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1twiA_HHsearch_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1twiA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.695581 (Target length: 611, Aligned residues: 425)
RMSD: 1.84
TM-score: 0.67149
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-------MLGNDTVEIKDGRFFID---GYDAIELAEK-----FGTPLYVMSEEQIKINYNRYIEAFKRWEEETGK--EFIVAYAYKANANLAITRLLAKLG----CGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGI---EANIRA-FNVDSISELILINETAKEL-GETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYV-NVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGI-EIEDVNLGGGLGIPYYKDKQ----IPTQKDLADAIINTM--LKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTK-------------------WV-------------------------------------------------------------------------MIDAGMNDMMRPAMY-EAYHHIINCK--VKNEKEVVSIAGGLCESSDVFGRDRE----LDKVE-VGD--VLAIFDVGAYGISMANNYNARGRPRMVLTSK--KGVF--LIRERETYADLIAKDIVPPHLL----------------------------------------------
::::::::::::::::: :::::::::: ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: :::::::::::::::::::::::::::: ::::::::::: :::::: ::::::::::::::::::: ::::::::::::::::::: ::::::::::::::::::::: : ::::::::: :::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: ::::::::::::::: :::::::::::::::::::::::::::::::.::::::::: :: ::::::::::::::: :::::::::: :::....::::::::::::::::::: ::::: ::: ::::::::::::::::::::::::::::::: :::: ::::::::::::::...
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGI-WAKSGGINSKFGLTSTELIEA-V-NLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDY-----DIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV