Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_1twiA_COMA_TS1.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_1twiA_COMA_TS1.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 1twiA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.69394433 (Target length: 611, Aligned residues: 424)
RMSD: 1.84
TM-score: 0.67078
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-------MLGNDTVEIKDGRFFI---DGYDAIELAEK-----FGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKE--FIVAYAYKANANLAITRLLAKLG----CGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGI---EANIR-AFNVDSISELILINETAKE-LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG-IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIE-IEDVNLGGGLGIPYYKDKQ----IPTQKDLADAIINTMLKYK-D-KVEMPNLILEPGRSLVATAGYLLGKVHHI-------------------KE----------TPVTKWVMIDA-G-----------M-------------NDM----M---------RPAM-----------Y----------EAY-----HHIINCKV-KNEK--EVVSIAGGLCESS--DVFGR-DRELDKVEV-GD--VLAIFDVGAYGISMANNYNARGRPRMVLTSK----KGVFLIRERETYADLIAKDIVPPHLL-----------------------------------------------
       ::::::::::::::::   :::::::::::     ::::::::::::::::::::::::::::::::::  :::::::::::::::::::::::    :::::::::::::::::: :::::::::::::::::::::   ::::: ::::::::::::::::::: :::::::::::::::::::::: :::::::::::::::: ::::::::::::: ::: :::::::::::::::::::::::::::::::::::: :::::::::::::::::::    ::::::::::::::::::: : :::::::::::::::::::::::::::::                   .:          ......::::: :           :             :::    :         ::::           .          :::     :::::::: ::::  ..::::::::...  ::::: ::::::::: ::  :::::::::::::::::::::::::::::::    ::::::::::::::::: :..                                                    
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYN-NEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWA-KSGGINSKFGLTSTELIEAVNLLKENKLLE-QFT-MIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLE-DLD-----YDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV