Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1twiA_COMA_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1twiA_COMA_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1twiA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.69394433 (Target length: 611, Aligned residues: 424)
RMSD: 1.84
TM-score: 0.67078
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-------MLGNDTVEIKDGRFFI---DGYDAIELAEK-----FGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKE--FIVAYAYKANANLAITRLLAKLG----CGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGI---EANIR-AFNVDSISELILINETAKE-LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG-IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIE-IEDVNLGGGLGIPYYKDKQ----IPTQKDLADAIINTMLKYK-D-KVEMPNLILEPGRSLVATAGYLLGKVHHI-------------------KE----------TPVTKWVMIDA-G-----------M-------------NDM----M---------RPAM-----------Y----------EAY-----HHIINCKV-KNEK--EVVSIAGGLCESS--DVFGR-DRELDKVEV-GD--VLAIFDVGAYGISMANNYNARGRPRMVLTSK----KGVFLIRERETYADLIAKDIVPPHLL-----------------------------------------------
:::::::::::::::: ::::::::::: :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: :::::::::::::::::: ::::::::::::::::::::: ::::: ::::::::::::::::::: :::::::::::::::::::::: :::::::::::::::: ::::::::::::: ::: :::::::::::::::::::::::::::::::::::: ::::::::::::::::::: ::::::::::::::::::: : ::::::::::::::::::::::::::::: .: ......::::: : : ::: : :::: . ::: :::::::: :::: ..::::::::... ::::: ::::::::: :: ::::::::::::::::::::::::::::::: ::::::::::::::::: :..
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYN-NEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWA-KSGGINSKFGLTSTELIEAVNLLKENKLLE-QFT-MIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLE-DLD-----YDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV