Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_1tufa_sp3_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_1tufa_sp3_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 1tufA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.6988543 (Target length: 611, Aligned residues: 427)
RMSD: 1.41
TM-score: 0.68363
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-------FLGNDTVEIKDGRFFID---GYDAIELAEKFG-----TPLYVMSEEQIKINYNRYIEAFKRWEEETG---KEFIVAYAYANANLAITRLLAKLGC----GADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEA---NIRAFNVD-SISELILINETAKEL-GETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG-IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGI-EIEDVNLGGGLGIPYYKDKQIP----TQKDLADAIINTMLKYKDK--VEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHH-------------------------------------------------------------------------------------------------IINCKVKNEKEVVSIAGGLCESS---DVFGRDR-ELDKVEVGDV---LAIFDVGAYGISMANNYN--ARGRPRMVLTSKKGVFLI--RERETYADLIAKDIVPPHLL-----------------------------------------
::::::::::::::::: :::::::::::: :::::::::::::::::::::::::::::: ::::::::::::::::::::::::: ::::::::::::::::::::::::::: ::::::::::::: :::::::: ::::::::::::::: ::::::::::::::::::::: :::::::::::::::: ::::::::::::::::: :::::::::::::::::::::::::::::::::: :::::::::::::::::::::: ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::.. .::..:::::::::::::::::: ::::::: :::::::::: :::::::::::::::::: :::::::::::::::::: ::::::::::::::::::::
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWA-KSGGINSKFGLTSTELIEAVNLLKENKLLEQFTM--IHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLY--KSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV