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RasMol generated image of per-residue accuracy for the model nFOLD4_1knwa_spk2_TS3.bfact.pdb

Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_1knwa_spk2_TS3.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 1knwA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.6661211 (Target length: 611, Aligned residues: 407)
RMSD: 1.91
TM-score: 0.64299
The alignment (template-model) is shown below:

(":" denotes the residue pairs of distance < 5.0 Angstrom)
----------PHSLFSTDTDLTA-----ENLLRLPAEF-----GCPVWVYDAQIIRRQIAALKQFDVV-------------RFAQKACSNIHILRLMREQG----VKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVS-E----LQIPVNAGSVDMLDQLGQVS-----PGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHL-Q-LVGIHMHIGSGVD----YAHLEQVCGAMVRQVIEFG-QDLQAISAGGGLSVPYQQGEE----AVDTEHYYGLWNAAREQIARHLGH-PVKLEIEPGRFLVAQSGVLITQVRSVKQMGSR-H-----------------F-----------VLVD-------------AGFNDL------------------------------------------MRPAMYG-S--YHHISALAAD--GRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLP--EVLFD-NG-QARLIRRRQTIEELLALELLHH----------------------------------------------------
          :::::::::::::     ::::::::::     :::::::::::::::::::::::::             ::::::::::::::::::::    :::::::::::::::::::::   :  ::::::::::::::::: :    ::::::::::::::::::::     ::::::::::: ::::::::::::::::::::::::::::::::::::: : :::::::::::::    ::::::::::::::::::: :::::::::::::::::::::    :::::::::::::::::::::::: :::::::::::::::::::::::::::::... .                 .           ::::             ::::::                                          ::::::: :  ::::::::::  ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  ::::: :: :::::::::.....                                                            
MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAYNNEG---A--PITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDT--------LEDLDYDIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV