Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_1knwa_sp3_TS3.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_1knwa_sp3_TS3.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 1knwA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.66939443 (Target length: 611, Aligned residues: 409)
RMSD: 1.63
TM-score: 0.65295
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
-----------------------PHSLFSTDTDLTAENLLRLPAE-FGCPVWVYDAQIIRRQIAALKQFDVV-------------RFAQKACSNIHILRLMREQG----VKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSE-----LQIPVNAGSVDMLDQLGQVSPG-----HRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHL--QLVGIHMHIGSGV----DYAHLEQVCGAMVRQVIEFGQ-DLQAISAGGGLSVPYQQGEEAV-D----TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLV---DA---------------------------------------GFNDL----------------MRPAMYGSYHHISALA-------------------ADGRS------------LEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFD---NG-QARLIRRRQTIEELLALELLHH----------------------------------------------
                       :::  : ::::: ::::::::: ::::::::::::::::::::::::::             ::::::::::::::::::::    ::::::::::::::::: :::    ::::::::::::::::::::     ::::::::::::::::::::::     :::::::::: ::::::::::::::::::::::::::::::::::::  :::::::::::::    ::::::::::::::::::::: :::::::::::::::::::::: :    ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::   ::                                       :::::                ::::::::::::::::                   :::::            ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::   :: :::::::::::.::......                                                
MMDYGIDIWGNENFIIKNGKVCINYE--K-KPAII-DIVKELRDDGYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY-NNE----GAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLH-SAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDY--DIHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV