Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_7odca2_spk2_TS9.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_7odca2_spk2_TS9.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 7odcA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.6246575 (Target length: 365, Aligned residues: 228)
RMSD: 2.19
TM-score: 0.59355
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
SSFTKDEFDCHILDEGFTAKDILDQKINDK--DAFY-VADLGDILKKHLRWLKAL--PRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKA--KLVLRIAT------------KFG-ATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRY-YVASAFTLAVNIIAKKTVWEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMH-VGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRPMWQLMK-------------------------------------------------------------------------------------------------------------------
.::: :::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: ::::::::::::: :::::::::: :::::::::::::::::::::: :::::::: .:: :::::::::::::: ::: :::::::::::::::::::::::::::::: : :: :::::::::::::::: :::::::::::::::::: :::::::::: ::::::... .. ...
------------------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER-FGKETHAYSVAYG-DNEIDEVVSH-ADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMD---RIN-GFMIHNNCENKDFGLFDRMLGEIEERFGAL-I-AR-VDWVSLGGGIHFTGDD-YPVDAFSARLRAFSDRYG-----VQIYLEPGEASITKSTTLEV----------------------------------------TV----------------------------------LDTL---------------------------------------YNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS