Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3gwqa_spk2_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3gwqa_spk2_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3gwqA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.88767123 (Target length: 365, Aligned residues: 324)
RMSD: 2.67
TM-score: 0.78669
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
ATIDPYSKGLGVPGTSIQLTDAARLEWNLLNEDVSLPAAVLYADRVEHNLKWQAFVAEY-GVKLAPHGKTTA-PQLFRRQLETGAWGITLATAHQVRAAY-HGGVSRVLANQLVGRRNVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELG--VP---G-GRTGVRDAAQRNAVLEAITRYPDTLKLAGVELY-------EGVL-KEEHEVREFLQSAVAVTRELVEQERFARAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGCYLTHDVGIYRKAQTDIFEGLLPALQLWAYVQSI-PEPD-RAIIGLGKRDSAFDAGPEP-ARHYRPGNEAPRDIAASEGWEIF----GLDQHAYLRIPAGADLKVGDIAFDISH-PCLTFD-----K---WRQVLVVDPAYRVTEVIET-FF-------
: :::::::::::::::::::::::::: :::::::::::: :::::::::: :::::::::::::::: :::::::::::::::::::::: : :::::::::::::::::::::::::::::::::: :: : ::::::::::::::::::: ::::::::: :::: :.:.:::::::::::::::: :::: ::::: ::::::::::::::::::::::::::::::: : :::::::::::::. :::: :::: : ::::::::: ::::: ::::::::......:.: ::..:::::::. :::: :::::::: :::::: : ::::::::::::::::::: ::
-------------------------------M-IETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDY-MDGTTSSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVV--S-HADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVM-----DRINGFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWV----SLGG-GIHFT-GDDYPVDAFSARLRAFSDRYGVQIYLEPGEA-------S----------ITKSTTLEVTVLDTLYNGKNLAIV-D----SSIEAHMLDLLIYRE-TAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAE-ELKV--GDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS