Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_3gwqa_sp3_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_3gwqa_sp3_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 3gwqA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.88767123 (Target length: 365, Aligned residues: 324)
RMSD: 2.51
TM-score: 0.79322
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
ATIDPYSKGLGVPGTSIQLTDAARLEWNLLNEDVSLPAAVLYADRVEHNLKWQAFV-AEYGVKLAPHGKTTAP-QLFRRQLETGAWGITLATAHQVRAAY-HGGVSRVLANQLVGRRNVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELGVP--------GG-R-TGVRDAAQRNAVLEAITRYPDTLKLAGVELYEG-VLKEEHEVREFLQSAVAVTRELVE-Q-E-RFARAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGCYLTHDVGIYRKAQTDIFEGLLPALQLWAYVQSIPE-PD-RAIIGLGKRDSAFDAGPEPARHYRPGNEAPRDIAA-S---EGWEIFGLDQHAYLRIPAGADLKVGDIAFDISHPCLT--------FD--KWRQVLVVDPAYRVTEVIETFF--------
: ::::::::::::::::::::::: :::::::::::::::: :::::::::: ::::::::::::::: :::::::::::::::::::::: : :::::::::::::::::::::::::::::::::::: :: : :::::::::::::::: : ::::::: :::::::::::::::::::::::: : . :::: ::: ::::::::::::::::::::::::::::::::: : :::::::::::::::: :: :::: : ::::::::::::::::::::::::: : ::::::::..::::::: ::::: .::::: ::::: :: .:::::::::::::::::::::
-------------------------------M-IETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYM-DGTTSSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVV--S-HADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRI--------N-GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGG-GIH-FTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEA--S---------------ITKSTTLEVTVLDTLYNGKNLAIV--D---SSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFA--EELKV-GDRISF-QDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS