Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2yxxa_spk2_TS5.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2yxxa_spk2_TS5.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2yxxA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9616438 (Target length: 365, Aligned residues: 351)
RMSD: 2.2
TM-score: 0.89305
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
DILRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGD-VVTKGELLAAKL-AGVP--SHTVVWNGNGKSRDQEHFLREDVRIVNVDSFEEEIWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFERFRSNIRGLHVHIGSQITRVEPFVEAFSKVVRASER-Y----GFEEINIGGGWGINYSGEELDLSSYREKVVPDLKRF-KRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGN--VLIRPALYSAYHRIFVLGKQGKERADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTSNN-YNSTTRPAEVLVRENGRISLIRRRETEDIFKDVV-
:: ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: :::: :::::::: : :::::::::::::::::::::::::::::::::::::::::::::::::::. ..::::...::..:.::: :::::::: : :::::::::::::::::::: : :::::::::: :: :::::::::::::::::::::: :::::::::::::::::::::::::::: ::::::::::: :::::: : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::...
-----MI---ETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERFGKETHAYSVAYGD--N---EIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPAR-PFSRLGEWDVPKVERVMD-RINGFMIH--N-NCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGG-IH-FTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLL-I-YRETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL-S