Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2yxxa_spk2_TS5.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2yxxa_spk2_TS5.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2yxxA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.9616438 (Target length: 365, Aligned residues: 351)
RMSD: 2.2
TM-score: 0.89305
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
DILRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGD-VVTKGELLAAKL-AGVP--SHTVVWNGNGKSRDQEHFLREDVRIVNVDSFEEEIWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFERFRSNIRGLHVHIGSQITRVEPFVEAFSKVVRASER-Y----GFEEINIGGGWGINYSGEELDLSSYREKVVPDLKRF-KRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGN--VLIRPALYSAYHRIFVLGKQGKERADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTSNN-YNSTTRPAEVLVRENGRISLIRRRETEDIFKDVV-
     ::   ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: ::::  ::::::::  :   :::::::::::::::::::::::::::::::::::::::::::::::::::. ..::::...::..:.::: ::::::::  : :::::::::::::::::::: :    :::::::::: :: :::::::::::::::::::::: :::::::::::::::::::::::::::: :::::::::::  :::::: : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::...  
-----MI---ETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERFGKETHAYSVAYGD--N---EIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPAR-PFSRLGEWDVPKVERVMD-RINGFMIH--N-NCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGG-IH-FTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLL-I-YRETAKVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL-S