Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2yxxA_COMA_TS1.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2yxxA_COMA_TS1.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2yxxA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.96712327 (Target length: 365, Aligned residues: 353)
RMSD: 0.87
TM-score: 0.95386
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
DILRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFG-DVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQ-EHFLREDVRIVNVDSFEE-EIWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFERFRSNIRGLHVHIGSQITRVEPFVEAFSKVVR-ASE--R-YGFEEINIGGGWGINYSGEELDLSSYREKVVPDLKRF-KRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGG-NVLIRPAL-YSAYHRIFVLGKQGKERADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYT-SNNYNSTTRPAEVLVRENGRISLIRRRETE-DIFKDVV
:::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: ::::::::: :::::: :::::::: ::::::::: :::::::: :::::::::::::::::::::::::::::::::::::::: ::::: ::::::::::::::::::::::::: ::: : ::::::::::::::: :::::::::::::::::: ::::::::::::::::::::::::::::: ::::::::: :::::::: ::::::::: :::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: :.::::::::: :::::::
--------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF-GKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKAA-GIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERV-MDRIN-GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGD----DYPVDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNG-KNLAIVDSSIEAHMLDLLIYRETAKVLP--NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELD-GSVRTVREFTYADYEQSLS