Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2qghA_COMA_TS6.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2qghA_COMA_TS6.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2qghA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9890411 (Target length: 365, Aligned residues: 361)
RMSD: 1.21
TM-score: 0.96541
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
NYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKK-NKRFVIVDAGMNDFLRPSL-YHAKHAIRVITPSEISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELALED-KIRVIRKREALEDLWRLEEEGL-
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: ::::::::::::::: ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: :: ::: ::::::::::::::::::::::: :::::::::::::::::::::::: : :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: ::::::::: ..:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::.
----MI---ETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF-GKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKA----AGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERV--MD----RIN-GFMIHNNCENKDFGLFDRMLGEI---EERFGALIARVDWVSLGGGIHFTG--D-DYPVDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLP--NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL----S