Links to interactive graphical output:

RasMol generated image of per-residue accuracy for the model nFOLD4_2plja_spk2_TS7.bfact.pdb



Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]

Jmol view of the per-residue accuracy for the model nFOLD4_2plja_spk2_TS7.bfact.pdb

[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]

Jmol view of the structural alignment of the model (blue) with the template 2pljA (red) using TM-align

Download the superposition file (RasMol script).

Coverage of target: 0.89863014 (Target length: 365, Aligned residues: 328)
RMSD: 1.17
TM-score: 0.87498
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
HSQSIFDIHPVLSAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNA--LPNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLSF---SKK-FGCSP---------EQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDD----GIYGSFSGLMFDDARYPLTTIKQGGELIPSVLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALN-EFV-----------------
                         ::::::::::::::::::::::::  :::::::::::::::::::::::::::::::::::::::::: ::::::::::: :::::::::::: :::::::::::::::::::::::::::::::   ::: :::::         :::::::::::   ::: :::::::::::::::::::::::::::::::   : :::::::::: :: :::::::::::::::::::::::  :::::::::::::::::::::::::::: :::::::::    ::::::::     : ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::                 
-------------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE-RFGKETHAYSV-AYGDNEIDEVVS-HADKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMD---RIN-GFMIHNNCENKDFGLFDRMLGEIEERFGALI---A-RVDWVSLGGG-IH-FTGDDYPVDAFSARLRAFSDRYG--VQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIY-----R-ETAKVLPNE-GSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS