Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2plja_sp3_TS7.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2plja_sp3_TS7.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2pljA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.90136987 (Target length: 365, Aligned residues: 329)
RMSD: 1.0
TM-score: 0.88421
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
HSQSIFDIHPVLSAEEIHLIEASVEQFGAPLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLSF---SKKFG-CSPEQ-A-------LVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDG----IYGSFSGLMFDDARYPLTTIKQGGELIPSVLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALN-EFV-----------------
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: ::::::::::: :::::::::::::: ::::::::::::::::::::::::::::: ::::: ::::: : :::::::: :::: ::::::::::::::::::::::::::::::: : :::::::::: :: :::::::::::::::::::::: : :::::::::::::::::::::::::::: :::::::::: :::::: : ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
-------------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE-RFGKETHAYSV-AYGDNEIDEVVSHA-DKIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVM--DRIN-GFMIHNNCENKDFGLFDRMLGEIEERFGALI---A-RVDWVSLGGG-IH-FTGDDYPVDAFSARLRAFSDRY-G-VQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLI-Y-----RETAKVL-PNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS