Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2oo0A_HHsearch_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2oo0A_HHsearch_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2oo0A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.95342463 (Target length: 365, Aligned residues: 348)
RMSD: 1.19
TM-score: 0.92904
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
AGENLYFQSLMNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPR--VTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDS------KAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQN---------
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: :::::::::: :::::::::::::::: ::::::::::::::::::::::::::::::: :::::::::::::::::::::: : : ::::::::::::::::::::::::: :::::::::::::::::::::::::: :::::::::::::: ::: :::::::::::::::::::::::::::::: :::::::::::::::::::: ::::::: ::. .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
--------------------------------------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE-RFGKETHAYS-VAYGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVM-D----R-INGFMIHNNCENKDFGLFDRMLGEI---EERFGALIARVDWVSLGGGIHFTGDD-YPVDAFSARLRAFS---DRY--GVQIYLEPGEASITKSTTLEVTVLDTLYNG--KNLAIVDSSIEAHMLDLLIY-RETAKVL--PNE---GSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGS-VRTVREFTYADYEQSLS