Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2o0tA_HHsearch_TS4.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2o0tA_HHsearch_TS4.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2o0tA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9917808 (Target length: 365, Aligned residues: 362)
RMSD: 1.45
TM-score: 0.95635
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
NELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFG-SGANVHYAA-AFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLSLEVR-
: ::::::::::::::::::::::::: ::::::::: ::::::::::::::::::::::::::::::: ::::::::::: ::::::::::::::: ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: ::: ::::::::::::::::::::::::::::: : : : ::::::::::::::::::: : : ::::::::::::::: : :::::::::::::::::::::::::::.. :::::::::::::::::::::::::::: :.: ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::.:::::::::::::::::.
----------------------------------M-IETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE-RFGKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKA----AGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVER---VMD------RINGFMIHNNCENKDFGLFDRMLGEIEER--F-G---A--LIARVDWVSLGGGIHFTGD--D-Y-PVDAFSARLRAFSDR-Y------GVQIYLEPGEASITKSTTLEVTVLDTLYN------GKNLAIVDSSIEAHMLDLLIYRETAKVL---PNE-GSHSYMICGKSCLAGDVFGEFRFAE-ELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSL--S