Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2nvaA_COMA_TS8.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2nvaA_COMA_TS8.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2nvaA (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.90958905 (Target length: 365, Aligned residues: 332)
RMSD: 1.12
TM-score: 0.89188
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
MNSVVNNILKAHPHQTKSFYVSSPKIVEDLIDQWTILFPRV--TPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPNCKMILRIRCDDP------NATVQLGNKFGANEDEIRHLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADID--LSTYMSDYINDAIKDFFPEDTVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVI-FEKSVPTPQLLRDVPDDEEYVPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGFGEYDVYYI----------------------
..:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: ::::::::: ::::::::::::::: ::::::::::::::::::::::::::::::: ::::::::::::::::::::: : :::::::::::::::::::::::::: :::::::::::::::::::::::::: :::::: :: ::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: :::::::::: . . :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
-------------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERF-GKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERV--M----DRINGFMIHNNCENKDFGLFDRMLGE---IEERFGALIARVDWVSLGGGIHFTGDDYPVDAFS--AR--LRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYN-GKNLAIVDSSIEAHMLDLLIYRETAKVLPN---E---G-SHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS