Links to interactive graphical output:
RasMol generated image of per-residue accuracy for the model nFOLD4_2j66A_HHsearch_TS3.bfact.pdb
Click here to download a PDB file of this model with residue accuracy predictions (Angstroms) in the B-factor column.
[RasMol colouring uses the reverse rainbow scheme from blue (high accuracy)
through green, yellow and orange to red (low accuracy).]
Jmol view of the per-residue accuracy for the model nFOLD4_2j66A_HHsearch_TS3.bfact.pdb
[Jmol colouring uses a gradient from blue (high accuracy)
through white to red (low accuracy).]
Jmol view of the structural alignment of the model (blue) with the template 2j66A (red) using TM-align
Download the superposition file (RasMol script).
Coverage of target: 0.9589041 (Target length: 365, Aligned residues: 350)
RMSD: 1.58
TM-score: 0.92653
The alignment (template-model) is shown below:
(":" denotes the residue pairs of distance < 5.0 Angstrom)
DQAEITALTKRFETPFYLYDGDFIEAHYRQLRSRTNP-AIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGELALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTARVAIRINPDKSF--T-AIKMGGVPRQFGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFEKALDIGKITRTVSDYVQEARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAAS--------PMEYIP---LEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGAYGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVATQL
.:::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: :::::::::::: ::::::::::::::: ::::::::::::::::: ::::::::::::::: : :::::::::::::::::::::: :: :::::::::::::::::::::::::::: : ::::::::::::::::::::: .::::::::::::::::::: ::::::::::::::::::::::::::::: :::::::::::::::: ::.. :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::...
----------MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGR-ERFGKETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKA----AGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVERV--MD-----RINGFMIHNNCENKDFGLFDRMLGEIEE-R---FGALIARVDWVSLGGGIHFTG--DDYPVDAFSARLRAFSDRYG------VQIYLEPGEASITKSTTLEVTVLDTLYNG-KNLAIVDSSIEAHMLDLLIYRETAKVLP--NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKN-WFNGVKMPAIAIRELDGSVRTVREFTYADYEQSLS